Cryptococcus neoformans var. grubii H99: CNAG_00572
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Entry
CNAG_00572 CDS
T08175
Name
(RefSeq) DNA excision repair protein ERCC-2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03022
Basal transcription factors
cng03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CNAG_00572
09124 Replication and repair
03420 Nucleotide excision repair
CNAG_00572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cng03021
]
CNAG_00572
03036 Chromosome and associated proteins [BR:
cng03036
]
CNAG_00572
03400 DNA repair and recombination proteins [BR:
cng03400
]
CNAG_00572
Enzymes [BR:
cng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CNAG_00572
Transcription machinery [BR:
cng03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CNAG_00572
Chromosome and associated proteins [BR:
cng03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CNAG_00572
DNA repair and recombination proteins [BR:
cng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CNAG_00572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
nSTAND3
YtxC
DUF4932
Motif
Other DBs
NCBI-GeneID:
23884367
NCBI-ProteinID:
XP_012046353
UniProt:
J9VF40
LinkDB
All DBs
Position
1:1474158..1477625
Genome browser
AA seq
799 aa
AA seq
DB search
MKFMLGDLPVLFPYDRLYPEQYSYMADLKTTLDAGGHCVLEMPSGTGKTVSLLSLIIAYM
QFYPNKRKLIYCSRTVPEIEKALAELKRLMVYRAEMGANDGDFRGLGLTSRRNLCLHPEV
SKEKKGKVVDSRCRDLTSAFACEKGRTDPGSVPLCSFHEELNNYEPGNLIPPGVYTLDDV
KKYGQEKGVCPYFTIRRMLPFLDVVIYSFHYLLDPKVAEQVSAEMSKESIVIFDEAHNID
NVCIESLSIDLTRPMLDSAARSVNKLSDKIAEIKETDAKKLEDEYAKLVEGLQEANERAE
DEDMLVSPVLSKDMVDEAVPGNIRKAEHFIAFLKRFIEYLKTRMRVLHVVAETPQSFLAH
LKEITYIEQRPLKFASERLTSLVRTLELTNLEEHSALQKVAGFGTLVATYEKGFLLILEP
YETEHATVPNPIFHFTCLDPSLAIAPVFDRFASVVITSGTISPLDMYPKMLQFQPVMEQS
YPMTLTRNAFLPMVITRGSDQVPISSRFEVRNDPAVVRNFGSILIEMARTVPDGVVAFFP
SYLYMESIVSAWYDMGILSEVWKHKLLFVETPDAMETSIALRNYREACNNGRGAVLLSVA
RGKVSEGIDFDHNYGRAVIMFGIPYQYTESRILKARLEFLRDNHRIRENDYLTFDAMRHA
AQCVGRVLRGKTDWGLMVFADKRFARQDKRAKLPKWINSYITEAHSNLSTDVAVSLAKKF
IRQISQPFDHTQTGISLWTLEDIEERQRQDKDEAERVEMTQSAVIRENAAEENDNAPLAS
DYMEIDDAELAGLYIPIDE
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatgctgggcgatcttcccgttctgttcccttacgatcggctgtaccctgag
caatactcctacatggcagacctgaaaacgacattggacgcgggtggtcattgtgtactt
gaaatgccctctggaacaggaaaaaccgtatcactgctatctttgatcattgcctatatg
caattttatcctaataagcgaaagctcatctactgctcacggacggttccggaaatagag
aaggccctagcagaactcaagcgattgatggtgtaccgcgcagagatgggggcaaatgat
ggtgatttcagaggattgggattgaccagtcggcggaatctttgtcttcacccggaagtt
agcaaagagaaaaaaggcaaagtagtcgactcgcggtgcagagatctcacctcagcgttc
gcttgtgaaaaagggaggactgatccgggaagcgtaccattatgtagtttccatgaggaa
ttgaacaactacgagcccggaaatcttatacccccaggtgtttatactttggatgatgta
aagaagtatggccaagaaaagggtgtctgtccgtattttacaatcagaagaatgttgccc
ttccttgacgttgtgatatactccttccattatctcctggatccaaaggtcgcggagcag
gtctccgctgaaatgagcaaggagagcattgtgatatttgacgaagcacacaacattgat
aatgtctgtatcgagtccctatccatcgatttgacaaggccaatgttggattcggcagca
agaagtgtcaataaacttagtgacaagattgcggaaattaaggagaccgatgcgaagaag
ctggaggatgaatatgcgaaactagtcgaaggtctgcaagaagccaatgagcgtgcggaa
gatgaggacatgcttgttagtccggttctgtcaaaagatatggtagatgaggctgtgcct
gggaacattcgaaaggcggagcattttatagctttcctcaaacgatttattgaatatctc
aagactaggatgcgcgtgttgcatgttgtagcagagacacctcagtcattcctagcgcat
ttgaaggaaataacatatattgagcaacggcctctcaaatttgcctctgagcgccttact
tccttggttcgcacattggaactgacaaacttggaagaacattctgcgctgcaaaaggtt
gccggttttgggacccttgtcgccacttacgaaaaaggattcctgctgattcttgagcct
tacgaaaccgagcatgccacagtgcctaacccaatttttcatttcacttgtcttgatcca
tcgctcgctatagcgcccgtttttgaccgcttcgcctcagtggtcatcacttccggtacc
atatctcccctcgacatgtaccccaaaatgttacaattccaacccgttatggaacagtcg
tatcctatgaccctcacccgaaacgcctttttaccaatggttataacccgaggcagtgat
caagtcccaatttcctccagatttgaggttagaaatgaccctgcggtcgtacgaaatttt
ggaagcatcttgattgagatggctcgaactgtccctgatggagtggtggcattctttccc
agttatctgtatatggaatctattgtttcagcctggtatgacatgggcattctaagtgag
gtgtggaaacataagttattgtttgtggaaactccagacgctatggaaacgagcatagcc
ctcaggaattatcgtgaggcatgcaataatggaaggggggcggtccttctctctgtggcg
cgaggaaaagtgtccgaaggaattgattttgaccacaattatgggcgagctgttatcatg
tttggcattccctatcaatacacggaatcacgtattctcaaagctcggctggagtttctt
cgagataatcataggatccgagaaaacgattaccttactttcgacgctatgcggcatgct
gcccaatgcgttggtcgtgtgttgcgaggaaagaccgactggggtctgatggtctttgcg
gacaagcgctttgcgaggcaagataagcgggcaaaacttccgaaatggatcaacagttat
attacggaggcccattccaacttgtctacggatgtggctgtttcgctagccaaaaagttc
atacgtcaaatctcgcaaccatttgatcacacacagacaggaatatctttatggactctt
gaggacatagaagagaggcaaagacaggataaggatgaagctgaaagggtcgaaatgacg
caatcagcagtaattagagagaatgctgccgaggagaatgacaatgctccgctcgctagc
gattacatggagatcgacgacgccgagttggcagggctgtatatacccatagatgaatag
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