Cryptococcus neoformans var. grubii H99: CNAG_00641
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Entry
CNAG_00641 CDS
T08175
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CNAG_00641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cng03021
]
CNAG_00641
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_00641
Transcription machinery [BR:
cng03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CNAG_00641
RNA polymerase I system
CNAG_00641
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
CNAG_00641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW2_Spt5
KOW4_SPT5
Spt5_N
KOW1_SPT5
KOWx_SPT5
KOW5_SPT5
CTD
KOW
DUF6897
Motif
Other DBs
NCBI-GeneID:
23884424
NCBI-ProteinID:
XP_012046854
UniProt:
J9VJH9
LinkDB
All DBs
Position
1:complement(1658176..1662429)
Genome browser
AA seq
1151 aa
AA seq
DB search
MSDIEVKSSPPESPVQEQEETRLAGRKRARVMDPDEEDDDTQVVNNQDEEKDAKEEDDEE
GGNGQAEGADEGEDDEDDDEDDDDDEDDEDEDDDGERRAKRRRKQKRFRFLDVEAEVDDE
DEEEDEDNDYGDVAEFIDEAPEDVGARDDHQHRRLNRVFGRNEEEDVHDIVQRLKERHAG
AARYNGDSDAVPQRLLMPGVNDPSLWKVVVKSGREHAICASIFRKVFAQQYSANPIDVIS
VFCRDSIPGMIFIEARQSASVSAAVNGIVGIFMSKGVNLVPIEEMAPLLKMKKKDVNLTP
GMWVRMKRGKHAGDLAQVVDVDQITSGVVGIKFIPRIDLTPREKRKERIAIGKPGGVRPP
ARLFAYDDVRKIYGRQSVRQGAQGSYLFDNDEYVDGFCIKDVKIPAVATEDVNPTLEEIS
RFTGDDDSTAKFDLSAIADANKNLSTSLLFPGDKIEVYEGEQTGLYGIVEAVSPDVIAIK
AEGGEVHGQTVEVPARSVRKRFDVGEHVKVLGGKHTDASGMVVEVKGDIVTLMSDLGEQE
IKVFSKDLRKAADTTNLTATKGLYDVHDMVMLDSTTAGLVTKVEGGLLRILDQNGAAKSV
SPEQVSIRRDNKRFAVATDSQGNDMKVGDNMKETDGEMRQGEVINIFRSIFVFLYNREYT
DNFGVFVARANSLISVTPKSAVNDLTKINPALNQQLPYGGASLMPAPTANLNRNRLINTL
VVVTKGTSKGLIGVIKDVQGENARVELKHNNKTLSVNLASLKRKDQKTGATFPLETAGIA
SAAGGYGTRPNAGQYDINPYGGATAMHPSMGGQTPALMGGRTPAVRFGQTPNPYAAGVQN
GKTPNPYATGVGGKTPSAAYASGGKTPAWGASGGKTPAYGMASGGKTPAYGIQGGKTPNA
YAMGPPGPSGGRTPAYGTYGRPEASGSRPSAMPPPPAPYSAPYSEPTPAGNGAPTPAAPG
NAYTAPTPYGAPTPYIAPTPGMPSLSAPTPGPGGGIAPTPFGAPTPYGVQSYGASALQQR
GLPWDWALDFRNVIVEIGPSYRPGSRNPLHFKRGFFDGKRFGYNDIIGESVRAILLDDSS
VVEEIPAEYLRPAKADSQGQVVVVIGGGPEQKGQQRTTQYENGGSWMMELEGGDMAPLVV
DGADLCRIWKV
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacatcgaagtaaaaagttcgccgcccgagtcacctgtacaagagcaggaggaa
acaaggttagccgggagaaagagggcaagagtaatggatcctgacgaagaggatgatgat
actcaggtcgtaaataatcaggatgaagagaaagatgcgaaggaagaggatgatgaagag
ggaggcaacggtcaagcggaaggggcagacgaaggtgaagatgacgaggacgatgatgag
gacgatgatgatgatgaagatgatgaagatgaagacgacgatggagagcgacgtgcaaaa
cgacgcagaaagcagaaaaggtttaggttcttggatgtcgaagccgaggtagacgacgag
gatgaggaagaagatgaagacaacgattacggagacgtcgccgaattcattgatgaggcg
cctgaggatgttggggctcgggatgatcatcaacatcgccgacttaatcgtgtctttgga
cgtaacgaagaggaggatgtgcatgatattgtacagagattgaaggagagacacgccggc
gcggcgaggtataacggcgacagtgacgcagtcccgcaaaggctgcttatgcctggtgtc
aatgatccaagcctgtggaaggtagtcgtcaagtccggccgcgaacacgctatttgtgct
tcaatcttccgaaaggtttttgcacaacaatactctgcgaaccccatcgacgtcatctcc
gtcttctgccgtgattccatccccggcatgatcttcatcgaagcccgtcagtccgcctct
gtgagcgccgctgttaacggcattgtcggcatattcatgtctaagggcgttaacctcgtt
cccattgaggagatggcccctttgctcaagatgaagaagaaagatgtcaatctcacgccg
gggatgtgggtaaggatgaagaggggcaaacacgcgggtgacttggcgcaggtggtggat
gttgatcagatcacgagcggtgtcgttggtataaagtttattcctcgcattgatctcacg
cctcgagagaagagaaaggaacgcattgccattgggaaacccggtggcgttcgcccacca
gctcgtctttttgcgtatgacgatgtacgaaagatctatggacgacaaagtgtgcgtcaa
ggcgctcaaggcagttatctgttcgacaacgatgaatatgtcgacgggttctgtatcaag
gatgtcaagatccctgcagttgcgacggaggacgttaaccctacccttgaagagatctca
cgtttcaccggtgacgatgactccacagccaaattcgatctttccgctatcgcggacgcc
aacaagaacctttccacatctctccttttccctggtgacaagattgaagtttatgaaggc
gaacaaacagggctgtacggtatcgtagaagccgtgtctcccgacgtcattgctatcaag
gctgagggtggagaggtccatggccagactgttgaggttcctgcgcgaagtgttcggaaa
cgcttcgacgtcggtgagcatgtcaaggtgctgggaggaaagcatacagatgcgtcgggt
atggtggtggaggtcaagggagacattgtgactttgatgtctgacctgggcgaacaagaa
atcaaagttttttctaaagatcttcgaaaagccgccgacaccaccaacctcacggctacg
aaaggtttatatgacgttcatgacatggtgatgttggattcaacaacagctggattagtg
accaaggtggaaggagggttgctgaggatcttggatcaaaacggtgctgcgaagagtgtt
tcacctgagcaggtctcaataagaagggacaacaagcgttttgctgtcgccacggattcg
caagggaatgacatgaaagttggtgacaacatgaaggaaactgatggagagatgcgacaa
ggagaagtcatcaacatcttccgttccatctttgtgtttctctataaccgcgaatacaca
gataacttcggtgttttcgttgctcgtgccaactctcttatatctgttactcccaaatca
gctgttaatgacctcaccaaaataaatccagcacttaatcagcagcttccttatggcggt
gcaagtcttatgccagctcccacggcaaatctcaacagaaacagactcattaacaccctt
gtggttgtaacaaaggggacgagtaagggattgattggtgtcatcaaggatgtacaaggt
gaaaacgcaagagtcgagctaaaacacaacaataagaccctctcagtcaacctcgcttcg
ctcaagagaaaagaccaaaaaactggtgcgacgttccctttggaaacggctggaatagct
tctgcggctggtggctatggcactcgtccaaatgctggccaatacgatatcaatccgtac
ggcggtgccacagccatgcatccctcgatgggcggacaaactccggctttgatgggcgga
agaacaccagctgttcgctttggacagacacctaacccatacgctgctggagtacaaaac
ggcaaaacgcccaacccgtatgcgacaggcgttgggggcaagacaccgtcagcggcctac
gcctctggtgggaagactcctgcatggggagcttctggaggtaagacaccagcatacggt
atggcatccggaggcaaaaccccggcatacggcatccaaggtggcaagacccccaacgca
tatgccatgggtcctcctggtccttctggtggtcgaacgccggcatatggaacttacggt
cgaccagaggcaagtggttccaggcccagcgctatgcctcctccccccgcgccttacagc
gccccgtacagtgaaccaacgccagccggtaatggagcaccgacacctgctgccccggga
aacgcttacacagctccaacaccttatggtgcacccactccctatattgcaccgactccc
ggtatgccttctctttcagcccctacacctggaccgggcggtggtattgcgcccacaccg
tttggagctccgacaccatatggagttcaaagctacggcgcttctgctctgcagcagcgg
ggtctaccttgggattgggctctcgacttcagaaacgttattgtggaaatcggcccttcc
tatcgtcccggttctcgtaaccctttgcatttcaagcgaggattctttgatgggaaacgg
tttggctacaatgacatcattggcgagagcgtacgggcgatactcttggatgactcttca
gttgtagaagagatacctgcagaatatctccgtccagccaaggcagacagtcaaggacaa
gttgtggttgtcattggtggtgggccagaacaaaagggtcaacaacggacaactcaatat
gagaacggagggtcttggatgatggagctggaagggggtgatatggctcctttggtcgtc
gatggcgcagacttgtgtaggatttggaaagtgtag
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