Cryptococcus neoformans var. grubii H99: CNAG_00785
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Entry
CNAG_00785 CDS
T08175
Name
(RefSeq) ATP-dependent RNA helicase eIF4A
KO
K03257
translation initiation factor 4A
Organism
cng
Cryptococcus neoformans var. grubii H99
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_00785
03012 Translation factors [BR:
cng03012
]
CNAG_00785
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cng04147
]
CNAG_00785
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CNAG_00785
mRNA cycle factors
Stress granule specific factors
CNAG_00785
Translation factors [BR:
cng03012
]
Eukaryotic type
Initiation factors
eIF-4
CNAG_00785
Exosome [BR:
cng04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CNAG_00785
Exosomal proteins of bladder cancer cells
CNAG_00785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
UvrD-helicase
Flavi_DEAD
tRNA-synt_1b
AAA_22
fragilysinNterm
Motif
Other DBs
NCBI-GeneID:
23884562
NCBI-ProteinID:
XP_012046959
UniProt:
J9VHS2
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All DBs
Position
1:2061883..2065763
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AA seq
401 aa
AA seq
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MSDTKGAAEQGLQMDGDLINSNWNEVVDNFDDMKLKGELLRGIYAYGFERPSAIQQRAIM
PIVTGRDCIAQAQSGTGKTATFSVSILQRIDTTVKKTQALVLAPTRELAQQIQKVVIALG
DYLNVDCHACVGGTAVREDIARLNEGPHIVVGTPGRVFDMINRGALKTEAVMMFCLDEAD
EMLSTGFKESIYEIFQLLPGETQVVLLSATMAPEVLDVTKKFMRDPIRILVKKDELTLEG
IRQFYINVEKEEWKLETLCDLYETVTITQAVIFCSTRRKVDWLTQQLHDRQFTVSAMHGD
MKQEEREVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSSKENYIHRIGRGGR
FGRKGVAINFVSNEDKNMLEEIETYYNTQVEEMPLNVADLI
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacactaagggtgcggccgagcaaggccttcaaatggacggtgacctcatcaac
tccaactggaacgaggttgttgacaacttcgacgacatgaagttgaagggcgagctcctc
cgtggtatctacgcttacggttttgagcgaccttctgctatccagcagcgtgctatcatg
cccatcgttactggccgtgactgcattgcccaggctcagtccggtaccggtaagaccgct
accttctctgtctctatccttcagaggatcgacaccactgttaagaagacccaggctctt
gtccttgctcccacccgagagctcgctcagcagattcaaaaggtcgttatcgctcttggt
gactacctcaacgtcgactgccacgcctgtgtcggtggtaccgccgttcgagaggacatt
gccaggcttaacgagggtccccacatcgttgtcggcacccccggccgtgtctttgacatg
attaaccgaggtgctcttaagaccgaggccgttatgatgttctgcctcgacgaggccgat
gagatgctttccactggtttcaaggagtccatctacgagatcttccagctcctccccgga
gagactcaggtcgttctcctttccgccaccatggctcccgaggtccttgacgtcactaag
aagttcatgagggaccccatcaggattctcgttaagaaggacgagcttacacttgaaggt
atccgacagttctacattaacgtcgagaaggaggagtggaagctcgagactctttgcgac
ttgtacgagaccgtcaccatcacccaggccgtcatcttctgttctacccgacgaaaggtc
gactggctcactcagcagctccacgaccgtcagttcaccgtctctgccatgcacggtgac
atgaagcaagaggagcgagaggtcatcatgaaggagttccgatccggttcttctcgagtt
cttatcaccaccgaccttttggcccgtggtatcgatgtccagcaggtttctttggtcatc
aactacgacctcccctcttctaaggagaactacatccaccgaattggtcgaggtggtcga
tttggccgaaagggtgttgccattaacttcgtttccaacgaggacaagaacatgcttgag
gagattgagacttactacaacacccaggttgaggagatgcctcttaacgttgccgacctc
atctaa
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