KEGG   Cryptococcus neoformans var. grubii H99: CNAG_00793
Entry
CNAG_00793        CDS       T08175                                 
Name
(RefSeq) DNA-directed RNA polymerase I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cng  Cryptococcus neoformans var. grubii H99
Pathway
cng03020  RNA polymerase
cng03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CNAG_00793
  09124 Replication and repair
   03420 Nucleotide excision repair
    CNAG_00793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cng03021]
    CNAG_00793
   03400 DNA repair and recombination proteins [BR:cng03400]
    CNAG_00793
Transcription machinery [BR:cng03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CNAG_00793
  RNA polymerase III system
   RNA polymerase III
     CNAG_00793
  RNA polymerase I system
   RNA polymerase I
     CNAG_00793
DNA repair and recombination proteins [BR:cng03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CNAG_00793
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1 Mrr_cat
Other DBs
NCBI-GeneID: 23884570
NCBI-ProteinID: XP_012046963
UniProt: J9VK16
LinkDB
Position
1:2094929..2096318
AA seq 255 aa
MLSIAVPFVLRIYPPLKISQKISFNHILPPSTNLSTTTRINHLPSEMSHEANRELARLWR
VSRTVHEMVRDRGYMLADYEINVSFEEFKDRHGATGSVDRSNMSFDAIHESDNTDKIFVY
FCADKNVSKASMKTFIGSMDKMGARRGIIIWSEKMSPAAKKTLQEMQSEYHLEDFPESDL
LVNITKHFLVPKHTVMKPEEKSALIKRYRLKETQLPRIMITDPVAKYYGLKRGQVMKIER
ASETAGRYITYRICM
NT seq 768 nt   +upstreamnt  +downstreamnt
atgttgtcaatcgctgtccccttcgtcctccgcatctatccacctctaaagatatcccaa
aaaatcagctttaaccacattctcccgcctagcaccaacctatccactaccacaagaatc
aatcatcttccatcagaaatgtcccatgaagcgaaccgagaattagctagattatggcgt
gtttcccgaaccgtccacgagatggttagagatcgaggatacatgcttgctgattatgag
atcaatgtttcgttcgaagagttcaaggacaggcatggtgcgactggatctgtcgatcgt
tccaacatgagttttgatgccattcacgaaagcgacaacaccgataagatctttgtgtac
ttttgcgcggacaagaatgtcagcaaggcttctatgaagacctttattggctctatggac
aagatgggcgctaggcgaggaatcatcatctggagtgaaaagatgtcaccggcagccaaa
aagacattacaagaaatgcaatctgaataccacctcgaagatttccccgaatccgacctt
ctcgtcaacatcaccaaacacttccttgttcccaagcacaccgtcatgaagcccgaagaa
aagtctgctctcattaagcgataccgattgaaggagactcagttaccacgtatcatgatc
accgaccccgtggccaaatactacggcttgaagagaggacaggttatgaagattgagcga
gcgagtgagactgctggacggtacattacctaccgtatttgcatgtaa

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