Cryptococcus neoformans var. grubii H99: CNAG_00853
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Entry
CNAG_00853 CDS
T08175
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNAG_00853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_00853
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CNAG_00853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
23884629
NCBI-ProteinID:
XP_012046452
UniProt:
J9VK65
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All DBs
Position
1:2256764..2258561
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AA seq
318 aa
AA seq
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MSTAAAAPTPTTTAGTTNAGGANAAAVFKRLHPASYLSRFLSSGYRPDGRPILPSSSSSS
QPTASASAADDVWRQVSINTGSISTAHGSALVRMGDTTMVCGVKAEIGEPDTETPGEGFI
VPNIDLPALSSPKFKPGPPGDEAQTYSNWLNELLVSSKTIPLSSLLIAPGKAAWVLYIDV
VCINYDGNAFDAAVLAVMAALRNTRLPKAVYDDDTQRTICSRTERYPLTLGRMPLACSFG
IFESTYLLADPTSFETPLLPTTLTIALDQDGQAALVRQEGLGGLRKRGKSGEEVVDEAWG
LSERRVEVLRRALDEAEA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacggcagcagcagcaccaacaccgacaacaacagcaggaacaacaaatgcagga
ggtgcaaacgcagcggcagtcttcaagcgtcttcatccggcctcgtatctctctagattc
ttgagctcaggctataggcctgatgggagacctatcctaccttcttcctcttcctcttct
cagcccaccgcctctgcctctgccgcggacgacgtatggagacaagtcagtatcaacacg
ggctcaatatctaccgcccatggttcggcgctcgtgaggatgggggacaccacgatggtg
tgcggggtgaaggctgaaattggggaaccggatacggagacgcctggggaggggtttata
gtacccaatatcgatctcccggcattgagttccccaaaattcaaacctggtcctcctgga
gatgaagcacaaacgtactcgaattggctaaacgagttgcttgtttcatcaaagacaatc
cccctttcatcattactcattgccccaggtaaagctgcttgggtactttatatcgatgtg
gtgtgcataaactatgatgggaatgcgtttgacgcagctgttttggctgtcatggctgcc
cttaggaatacgagattaccgaaagcggtctacgatgatgacactcaacggacgatttgt
tcgaggacagagagatacccgttgacgttggggaggatgcccctggcgtgttcgtttggg
atttttgagagcacctacttacttgcagacccaacatcgttcgaaaccccattgctacct
accaccctcaccatcgctttggaccaagatggacaagcggctctcgttcgacaagaaggt
cttggtggtttgaggaaaagagggaaaagtggggaagaggtggtggatgaagcgtggggg
ttgagcgagaggcgggtggaggttttgagaagggctttggatgaggctgaggcgtga
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