Cryptococcus neoformans var. grubii H99: CNAG_01146
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Entry
CNAG_01146 CDS
T08175
Name
(RefSeq) U3 small nucleolar RNA-associated protein 22
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CNAG_01146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cng03009
]
CNAG_01146
Ribosome biogenesis [BR:
cng03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CNAG_01146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D5
Nrap
Nrap_D6
Nrap_D3
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
23884889
NCBI-ProteinID:
XP_012049043
UniProt:
J9VQX4
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All DBs
Position
5:complement(1080205..1084412)
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AA seq
1241 aa
AA seq
DB search
MRNMVAQQSLKRKAALGNGSGNKRGPALRQSSQAENENGLQKLGNESSISYDEEAMGQLE
DPMIDPQDSSDGEGSFSDVDVHEEASESEEYEQPTAGPSGSSKNLYKAPTLSEMEALRHV
EETGGATFSLQLSELLESSLLPTAPHAALKDLLTAIHSRILGMSAVESLHPAKAIKRIGI
KVPFPGPAEFSPLKNSKEIKWTLGWAKPEEIFIGGSWSVVGGYRKEKREMGGIDLVVAMP
HGIFTPKDRLDYRYFHKRMFYLAVIFSELQRLATKEGELKGVKIEWSTNMADERRPIVVV
HAGKDQGLKSKVEIRIHASIPSSLFPLSSLSPTKSLVRTTVFANTDQSNATPSPLYNTSI
LHDTLHKPHLLHLHRLSQLLPSNARTVDSFLALWRIWAKRRGIRRERGGSAWLAGMVLGW
VINGGWLGGVGGKREQVKKVAGVGRGLGAWGALRAAWEFLAHTDFKQTPIFLHPPSSPSS
FEHSVFLTFSHVFTDPTGLVNIFAGWDEGEIDFLRYHARETLAMLEDESGERFADVFLKE
FDLGPAVFDEFFHVDISSARLPDDLCKRSEHPSVSSLAMTVFSSTLHQGLSNRVNFVHIR
PISEHGLSVGLLLDPLHANRVLDIGPSSDKPLESEAFRGLWEEKAELRRFKDGSIAESVV
WDLSRPEDAALIPSKIVRYLLEKHYSIPGDAVTSFSSSQNWLGLIQIPSSARDAITIKGS
EKLGFRPMLSGYDSLYKVLKDIDHKLPLAVLNVQPSSPLLRYSSTFVPHPVDIHRFSAAP
DCIKYIPSADVILQFESSPKWPDDLAAVQKVKLALFEKLARTLPSRLPETKAEIVFDAGA
SEIEDQASLVVMLPEGVSFRLRIYYEREKTMLERVLQEEKPLFATSLPYPPRRLVAPALA
IHLERFHYLPAHHSSLAPMHHRYPTYSSACRLLKRWFAAHMLLGKSGVREEIVELIMAGV
YLEPGRGKTPSSAVGGFMRAMELLECWDWRTEPLLIPIISASSPSSASASGRVRFPAELK
EEALKLFEHLRAKEKGTEAKEGSVHAWVVCTEQDMEGMRWTKGIGKAVAARVGALAKATV
KAVKDSVERGSLDVKALFITPLEHYDIIIHLSPKLLSTSAQSILPDPSLWEPHLKYRNLT
SSSEESDGMRIDFDPAALFVDDLKRIYGDSLMFFIDRHGGDVVGGVWNLARDGARGLKSF
LGWNGMPVKSEAELVEINKEAIIGEIARLGQDLVVKIERRR
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacatggtcgcccaacaatcactcaaaaggaaagcggccctggggaatgggtca
gggaacaagcggggaccggccctccgacaatcctcccaagctgaaaatgagaacggtctc
cagaaattggggaatgaatcatcaattagctacgacgaggaagccatgggacagcttgaa
gatccaatgatcgacccacaagactcttccgacggcgagggatccttcagcgacgtagat
gtccacgaagaagcttctgaaagcgaagagtacgagcaacccactgcagggccttctggc
tcctccaaaaacctttacaaggcaccgaccttgtcagaaatggaggcacttcgtcatgtc
gaagaaactggtggtgcaaccttttctttgcaattatcagagcttttggagtcttctctt
ttgccgaccgcaccccacgccgctctcaaagacttattaacagccattcactccagaatc
cttgggatgtccgcggtagaaagcttacatcctgccaaggctattaagcggatcggcata
aaggtgccattccctggccctgcagagttctcgcctctcaagaatagcaaagagatcaag
tggacgttgggatgggccaagcccgaagaaattttcatcgggggcagctggagtgttgtg
ggtggatacagaaaggaaaagagggaaatgggagggatcgatcttgtagttgcaatgccg
catggcatatttacaccaaaagataggcttgattacagatatttccacaagcgaatgttc
tatctagctgtcatcttctcagaactgcaacgattggctactaaagaaggtgaattaaaa
ggagtgaagattgagtggtctacaaacatggccgatgagagacgacctatcgttgtcgtc
catgccggtaaggatcaagggctcaaatccaaagtggaaatacgtatccacgcctccatc
ccttcatcccttttccctctgtcatctttatctccaacgaaatcccttgttcgcactacc
gtattcgccaatactgaccaatctaatgctaccccatcacctttatacaatacatctata
ttacatgacaccctgcacaaacctcatcttctccacttacaccgactttctcaacttctt
ccatcaaatgctcgcactgttgactccttccttgcgctatggagaatctgggcaaaacga
agggggatacgaagagaaagaggcggcagtgcatggttagctggaatggtattgggttgg
gtcatcaacggaggctggctgggcggtgtaggcggaaagagagagcaggtgaaaaaagtt
gcaggcgtaggtaggggcttgggagcttggggcgcccttcgggctgcctgggagtttttg
gctcataccgattttaaacaaacccctatctttctccacccgccctcctcaccttcatcc
ttcgagcattctgtgtttcttaccttctctcacgtatttacggaccccactggcctcgtc
aatatatttgctggctgggacgagggtgaaatcgatttcttaagatatcacgcgagggag
acattggcgatgttggaagatgaaagcggagagcgattcgcggatgtcttcctaaaggaa
tttgatctcggtcctgcggtgtttgatgaattcttccacgtcgacatctcatcagctaga
ctcccagatgatctatgtaaacgctccgaacacccttcggtctcttctctcgctatgacc
gtcttctcttcgactctccaccaaggtctctccaaccgcgtgaattttgttcatatccgc
ccaatttctgaacacggcctgtctgtgggattgcttttagaccctttgcatgccaaccgc
gtcctcgacattgggccatcttctgacaagcctttggaaagcgaagcttttcgtggactt
tgggaggagaaagctgagctgcgaaggttcaaggatgggagcattgcagaaagtgtggtc
tgggacctctcgagacctgaagatgcggctttgattccaagtaaaattgtcagatatctt
ctggaaaaacattactctatccccggagacgcggttacctccttctccagctcgcaaaac
tggttaggtctcattcaaatcccatcgtccgctagggatgcgatcactatcaagggttct
gagaagcttggcttccgaccgatgctgagtggctatgatagcctttacaaagttttgaaa
gatatcgaccacaaacttcccctcgctgttctcaatgtccagccttcttctcctctcctt
cgctattcctctacatttgtacctcatcccgtggacattcatcgcttttccgctgccccg
gattgcatcaaatacattccttctgcagatgtaattttacaattcgagagttcaccaaaa
tggcccgacgaccttgcggccgtccaaaaggtcaagcttgctttattcgaaaaattggca
agaactctaccgtcaaggcttccggagacaaaagctgaaattgtttttgacgctggggcg
agtgagatcgaagaccaagcatctttggtagtaatgctcccagaaggcgtttcctttagg
cttcggatctactatgagcgagagaaaactatgctcgaacgagtgctccaagaagaaaaa
ccgcttttcgctacctctcttccctatccccctcgtcgacttgtggctcctgctcttgcg
attcacctcgaaagattccattacctacctgctcatcattcttcccttgcgccgatgcac
cacaggtatcccacatattcctctgcttgccgtctcttgaagaggtggtttgctgctcat
atgcttttaggtaaaagtggagtgagggaagagatagtcgaactgatcatggcgggcgtg
tatctcgagccaggtaggggaaagacgccttctagtgctgtaggaggattcatgagagca
atggaattgctggaatgttgggactggaggactgagcccttgctcattcccatcatcagt
gcttcttctccatcgtcagcttccgcgtccggacgcgtgaggttccctgctgagcttaaa
gaggaggcacttaaattgtttgagcatctccgtgccaaggagaagggcactgaagccaaa
gaagggagtgtccatgcgtgggtcgtgtgcacagaacaggatatggaagggatgaggtgg
acgaagggaattggcaaggctgtggcggcacgggtgggagcgttggcaaaagctactgtg
aaggccgtcaaagatagtgtcgaaaggggcagtctagatgtcaaggcgctgttcatcact
cccttggagcactacgacatcattatccacttatctcccaaactcttgtcgacatctgct
caatctatcctgcctgacccctctttatgggagcctcacctcaagtaccgcaacctcact
tcatcctcagaagagagcgatggtatgaggatcgattttgatccggccgccttgttcgtc
gacgatctgaagaggatttacggtgacagcctcatgttctttattgaccgtcacgggggc
gatgtagtgggaggcgtttggaatcttgcaagagatggcgcgcgggggctgaaatcattc
ttaggttggaacggtatgcctgtaaagtctgaagccgagctcgtggaaatcaataaagag
gcgattatcggggaaattgcaagacttgggcaagatttggtagtgaagattgagagaagg
cgataa
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