Cryptococcus neoformans var. grubii H99: CNAG_01189
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Entry
CNAG_01189 CDS
T08175
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CNAG_01189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cng03021
]
CNAG_01189
Enzymes [BR:
cng01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CNAG_01189
Transcription machinery [BR:
cng03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
CNAG_01189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
23884930
NCBI-ProteinID:
XP_012049378
UniProt:
J9VQT9
LinkDB
All DBs
Position
5:966368..972298
Genome browser
AA seq
1727 aa
AA seq
DB search
MDISHSIHSEVSSLSFSFLSADDIKAISVKKVDNPILLDNLNLPTRGGLYDPKLGPMGSR
DLCETCHLSYFACPGHFGHIELPTPVYHPLFMNQCYHLLRGVCLYCHHFKMPEIVAASYV
ARLRLLDAGLLTESHEVAALFDNAIGKSSRQKDNDEDEDAEGDVDMDAPAPQTIESAAEF
MVRIEAYVQHHLKLAKQNAGGRDSKVEDGYKDGLVFEERKKLLHEFGKKIWNRCTRCTAY
GNTFRKEKAIKIIEYDLTPKQKLANKLSNLRRPDVLAASGKYSSKQRRSDGDIDEGIEMD
SDKSSVSEGEGESLDEEEEEEQDVGQTVAKTASGQVKGTRGRHERVMSPAEVRAHLRLLF
GKEPEICRLIYGRHGNPAALSSVAPPPLADMFFMEVVPVTPTRFRPAARMGDELFENSQN
SLLTTVLSTCQRIQKLNQDLINQAKAERGELVLDAVAKAQGGRTFELLLEALIKLQHDVN
SFVDSTKNPAVMRQGKLPPPGVKQLLEKKEGLFRKHMMGKRVNYAARSVISPDINIETNE
IGIPPVFAKKLTYPEPVTQQNVAELRQLVINGPKIHPGAALVQNEDGTQISLDKLTLDQR
ISLANQLLTPQGSEDNIGAASIGPAAKNKKVYRHIRDGDIVILNRQPTLHKPSMMCHRVK
VLLGEKTIRMHYANCNSYNADFDGDEMNIHFPQNEVARAEAQMIANTDNQYLVPTSGGPL
RGLIQDHVVAGVWMCNKSSFFTREQYFQLIYGALRTENNYTGRSRIITLPPAIFKPKPLW
TGKQIMSTILTNLTPSNAQGLNLTSRNKVQNKLWRRDDSSDPAMSEENVIFLDGHLVCGV
LDKSQYGASGYGLVHSVHELYGPYVANRLLGVLSRLLTKYLQHDAFSCRMDDLILTAEGE
KIRKDILDKASGDGAIAAMKYVGLPEGSKIEDPDTAKNLAIRLEEILRDDHLMAGLDAVM
QSAFNKTTSKINNDVLPDHLVRPFPDNNMQMMTISGAKGSKVNASQISTLLGQQALEGRR
VPTMVSGKTLPSFKAFDTSARAGGYVANRFLTGIRPQEYYFHCMAGREGLIDTAVKTSRS
GYLQRCLIKHLEGVKVHYDHTVRDSDSSVLQFLYGEDSLDVTKQTHLNKFDFAAANHLSL
LNKVRPGDTAGKVSDEALSHMKKALKKPHKHVPALSEYSPSRYIGSMSEAYAKKLNNYIE
DNKLGYIAKKGENKASPYTSERVPEKEFLGLARARYMRSLVEPGEAVGLLASQGVGEPST
QMTLNTFHLAGHGAANVTLGIPRLREIVMTASSKPTTPTMKLPLREHISDKDIETFVKQV
SRLTLSEVVERVTVTERLSSKSSESDSRQRKYTVLLEFYPPEEYGTEYEITPEQLHESLA
WHFAPRLKKEIQNEIRRVAKTKEQEAQVGKGRKVRVGGDEGDEEEVDREPDVRRRGRDDE
LDNDDEDSYQLKRAAQAKQHEYEADSDVDSGVADLEDFVEKELEEDDEEDVEDDAAEKAK
KDQKADDWAELFKLASKYATTFSFDGHSGKSAQFDLEFPASAPKLLLVDIIERTCRAAVV
HEIENIGRCMKIFSDKGEFTRSLITEGSNLRGMWALADELVDLDRLSSNDIYAILTTFGV
EAARRAIIDEVSSVFGAYGIAVDYRHLTIIADYMTHAGGFRPFNRTGISAKSSPLLKASF
ETTVAFLSEATLHGDFDDLTSPAAKIVMGKPSASGTGAFDIRAPTRL
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atggacatctcgcactcaattcattccgaagtatcctccctctctttctccttcctctcc
gcagatgatatcaaagccatctccgtcaaaaaggttgacaaccctatcttgcttgacaac
ctcaatctccctaccagaggtggtctatatgatcccaaacttggccctatgggctctaga
gacctatgtgaaacatgtcacctttcatactttgcctgtcccgggcattttggccacatt
gagctccccacaccagtatatcacccgctatttatgaaccagtgctatcacttgttgcgt
ggcgtgtgtctctactgccatcattttaaaatgcccgagattgtcgccgcttcctatgtc
gctcgtctccgtcttttggatgccggtctcctgacggagtcacatgaagtagccgctctt
ttcgacaatgctattggaaaatcttcgcgccaaaaagataacgatgaggacgaggatgcg
gaaggtgacgttgatatggatgcccctgctcctcagaccattgagtccgcagccgagttc
atggttaggatcgaggcttacgttcaacatcacctcaaattggccaagcaaaatgcagga
ggcagggacagcaaagtggaggacggttacaaagacggtcttgtcttcgaagaacggaag
aaattgctgcacgaattcgggaaaaagatctggaacaggtgtactcgatgtaccgcttat
ggtaacaccttccgtaaagagaaggccattaagatcattgaatacgatctcactccaaag
cagaaactcgccaataaattgtccaatcttcgtcgccccgatgtcttggctgcttctggc
aaatactcatccaagcaacgccgttcagatggcgatatcgacgaaggtatcgaaatggac
agcgacaaatccagtgtttctgaaggagaaggcgagtccttggatgaagaggaagaagag
gagcaagacgttgggcaaacggtggccaaaactgctagtggtcaagtcaagggtactcga
ggtcgtcacgaacgtgtcatgtctcctgcggaagtccgcgctcaccttcgtcttcttttt
ggcaaggagcccgaaatttgtcgcttgatttatggcagacatggaaacccggcagccctt
tcctccgttgctcctcccccccttgcagacatgtttttcatggaagtggtgccggtcact
cctactcgtttccgacctgctgccagaatgggtgatgaacttttcgagaacagccagaac
tctcttctcacgacggtcttaagtacctgtcaacgaattcaaaagctcaatcaagatctg
atcaatcaagctaaagcggaacgaggcgagcttgtccttgatgccgtagctaaagcccaa
ggcgggcggacgtttgagctcttgcttgaggctttaatcaagctccagcacgatgttaac
agttttgttgacagcactaaaaatccggcagtcatgaggcagggtaagttaccaccacct
ggtgtcaagcagcttttggagaagaaggagggtttgttcagaaaacatatgatgggcaaa
cgagtcaactatgccgctcgatctgtcatatcgcccgacatcaatatcgaaaccaacgaa
attggtatccctcctgttttcgccaagaagctcacgtatcccgaacctgttactcaacag
aatgtcgccgaactccgtcaacttgtaatcaatggtcctaaaattcatcccggcgcagca
cttgttcagaacgaggacggtacccagatttctctcgataaattgactctcgatcagaga
atttctctcgccaaccagctgttgacccctcaagggagcgaagacaacattggagccgcc
agtattggcccagctgctaagaataagaaggtgtacaggcatatcagggacggtgacatc
gtcattctcaaccgacaaccaactctgcacaagccttcaatgatgtgccatcgcgtcaaa
gtcctgttgggagagaaaacgatcagaatgcactatgccaactgtaattcgtacaatgcg
gattttgatggcgatgagatgaacattcacttccctcaaaacgaagtcgctagagctgaa
gctcagatgatcgccaataccgataatcaatatttggtccccacatctggtggtcctctt
cgaggtcttattcaagaccacgtcgtggctggtgtatggatgtgcaacaaatcttccttt
ttcacacgagagcaatatttccagctcatttatggtgcccttcgtaccgagaacaactac
actggtcgatctaggataatcacccttcctcccgccatcttcaagcccaagcccctttgg
accggtaaacagatcatgtccaccattctcaccaatcttactccttccaatgctcagggt
cttaaccttacttcaaggaacaaggtgcaaaacaagctttggagaagagacgactcttct
gatcctgcgatgagtgaggagaatgtcatcttccttgacggtcatctagtctgcggtgtt
ctcgacaagtcgcaatacggtgcttctgggtatggtcttgtgcactctgtgcatgagctg
tacggtccatatgttgccaacaggctgcttggcgttttgtctcgtcttttgacaaagtat
cttcaacatgacgctttctcatgtaggatggatgatttgattctcactgctgaaggcgag
aaaattcgaaaggatatccttgacaaggcttccggtgatggcgccatagcggccatgaag
tacgttggcttgcccgagggttccaagattgaagaccccgatactgctaagaaccttgcc
attcggttggaagaaatcctgcgagatgatcatcttatggcaggtcttgatgctgtcatg
caatccgctttcaacaagaccacctccaagattaacaacgacgttttgcccgatcatctc
gtccgacctttccccgacaacaacatgcaaatgatgacaatatccggtgccaagggctca
aaggttaacgcctctcaaatctctacactgctgggtcagcaagcccttgaaggtcgccgt
gtgccaacaatggtttccggtaagacgcttccgtccttcaaggcctttgacactagcgcc
cgggcgggtggatacgttgccaaccgatttttgactggtatccgccctcaggagtactac
tttcattgcatggctggtcgagaaggccttatcgacacggctgtcaagactagtcgatct
ggttatcttcagcgatgtttgatcaagcatctcgaaggtgtaaaggtccattacgatcac
accgtacgagacagcgactcttctgtattacaattcctctatggtgaagattcgcttgat
gtgactaagcagacccacctgaacaagttcgatttcgcagccgccaaccatctttcttta
cttaataaggttcgaccgggcgacaccgcaggaaaggtgtctgacgaggccctctctcac
atgaagaaagccctcaagaagccccacaagcatgtacccgctctttctgaatactcgccg
tcccgatatatcggtagtatgtctgaggcttatgctaaaaagctgaacaactacatcgaa
gacaacaagctcggatacatagcgaagaagggagagaacaaggctagtccttatacaagc
gaaagagttccagagaaagagtttttgggtctggctagagctcgatatatgaggagtttg
gtggagcccggagaagctgttggtttgttagctagtcaaggtgtcggtgaaccatccaca
caaatgacactaaacactttccatttagctggtcacggcgctgccaacgtcacccttggt
attcctcgtctgcgagaaattgtcatgactgcctcctccaaaccgaccactcctactatg
aaacttcctctacgagaacacatttccgacaaggacatcgaaacttttgtcaagcaagta
tcgcggcttactctttccgaagttgtggagcgggttactgtcaccgaacgtctatcatcc
aagtcttccgaatccgactctcgtcagcgtaaatacactgtcctgcttgagttctacccc
cctgaagaatatggtacagaatacgagattacccccgaacaacttcatgagagtttggct
tggcattttgctcctagactcaagaaggaaatccaaaacgagattagaagagtagctaag
accaaagagcaggaagcccaggttgggaaaggtcgcaaggtccgagttggtggtgatgaa
ggggacgaggaggaagttgacagagaacctgacgtcaggagaagagggcgggacgacgag
ttggacaacgatgacgaggactcctatcaactcaaacgtgcggctcaagccaagcaacac
gagtatgaggcggattccgatgtcgattctggcgttgcagacctcgaggactttgtggag
aaggagcttgaagaggatgatgaggaagatgtggaagacgacgccgcagagaaggcaaag
aaggaccagaaggcggatgactgggcagaattgttcaagcttgctagcaagtatgcgaca
accttcagctttgacggtcacagtggaaagtcggcccagtttgaccttgagttccctgcg
agtgcacccaagttgttgttggtcgatattattgagagaacttgtcgagctgctgttgtt
cacgaaatcgagaacattggcaggtgcatgaagattttctccgataaaggagagttcact
cgatcgctcatcactgagggctctaatctcaggggcatgtgggccctcgctgatgagctt
gtcgaccttgacaggctctcctccaacgatatctacgcgattcttacaactttcggtgtc
gaagctgcccgtcgagccatcattgatgaagtgtcgagcgtcttcggagcttatggtatt
gctgttgactacaggcatttaaccattattgcggattacatgactcatgccggtggtttc
aggccattcaaccgtactggtatctctgccaaatcttcaccgctactcaaagcgtcattt
gaaacaaccgttgccttcctgtccgaagccaccctccatggtgactttgatgacctgacg
agccccgcagccaagattgtgatgggtaaacctagtgcgagcggtactggtgcttttgac
atacgtgctcctacaagattatag
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integrated database retrieval system
