Cryptococcus neoformans var. grubii H99: CNAG_01198
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Entry
CNAG_01198 CDS
T08175
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CNAG_01198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_01198
03041 Spliceosome [BR:
cng03041
]
CNAG_01198
03032 DNA replication proteins [BR:
cng03032
]
CNAG_01198
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
CNAG_01198
Spliceosome [BR:
cng03041
]
Complex A
U1 snRNP components
Sm proteins
CNAG_01198
U2 snRNP components
CNAG_01198
Complex B
U1 snRNP components
CNAG_01198
U4/U6.U5 tri-snRNP components
CNAG_01198
Complex C
U2 snRNP components
CNAG_01198
DNA replication proteins [BR:
cng03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
CNAG_01198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
23884939
NCBI-ProteinID:
XP_012049028
UniProt:
J9VTB9
LinkDB
All DBs
Position
5:945170..945988
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AA seq
87 aa
AA seq
DB search
MSAIAPVNPKPFLQDLTGKVVYVRLKWGLEYRGYLVSTDGYMNLQLANTEEIENGKSNGA
LGEVLIRCNNVLYIREAKDRAGGMDQD
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccatcgcacccgttaacccaaagcccttcctccaagatctcacaggcaaggtc
gtctatgtccgattaaagtggggtctcgagtacaggggctatctcgtatccacagatggc
tacatgaacttgcaacttgctaacactgaagaaattgagaacggcaagtcaaatggtgct
ttgggagaagtccttatccgttgcaacaatgttctgtacataagagaggccaaagacagg
gcaggcgggatggatcaagattaa
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