Cryptococcus neoformans var. grubii H99: CNAG_01338
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Entry
CNAG_01338 CDS
T08175
Name
(RefSeq) xeroderma pigmentosum group C-complementing protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CNAG_01338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cng03400
]
CNAG_01338
DNA repair and recombination proteins [BR:
cng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
CNAG_01338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_2
BHD_1
Transglut_core
Motif
Other DBs
NCBI-GeneID:
23885062
NCBI-ProteinID:
XP_012048971
UniProt:
J9VK11
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All DBs
Position
5:561412..565790
Genome browser
AA seq
988 aa
AA seq
DB search
MSASRPKSSRVIQKPRGISALAARIPTSTKQQPSVGGKRKAPTPATHKGTRPVSPISVPS
TVVSVSDNDEDDEDEFEEVPIPIASNEVQGDNENEEGEGDEDEDEEDDDGVIHLEIGGET
AEEKAKRMILAKRKKPLTARDRALRLEVHKVHVVALLASASVRNKWCNNSLLKARLLSLL
PHPLQAAFNIPPSRFPDRAQRSRLFFEALQSLVSWWSQTFFDVSDYALGLRTRPWDEVQG
IIESTSKAHTPFSLPSSGHGDGEKSNKSASKGKGKAAANEELSDQLAFGSGAERLRSVNS
LMKKALQQEGSRDVSAQLFVALARACGLGVRLVTSLQAVPWRAEKVTTKKKAIGAGKGGR
TLASRQGLGDGDEDDDEDEMEEVPIPNDEEKSVTPEAGSRRLKDSADLYRLRKYKPPARK
LGTPTKSKPKASQSLADQPPVFWAEVFNRSDQRWIPVDPVRGIIRKKLGYEPPTDSGPVR
MLYVVAFEEDGYARDVTLRYTKNFYAKTSKLRVPTKPNEPQWWSDIVMGFLRRPHHLNRD
DMEDAELEMSQMTEGMPMHMSGFKDHPIYVLERHLKRDQVLNTTNPVGRFRGEAVYRRSS
VQNCKTAENWMRSGRKIKEGQEPLKWVKQRAVTLQKRRAQELAKQEGEEVTQGLYAEWQT
EVYRPPPIKDGIIPRNSFGNIDLYVPTMLPLGAVHLPYKGIAKVAKDLGVSYAEACTGFE
FKKQRAVPIIKGIVVATEKEQEVLDAYEESTIAAEERERMKREDRALKRWAKLVNGLRLR
LRLQQEYGSKDRVNGTSSNLFEGTGDKGETQINPRGTSAREILAAAQQQSTKDWEERVRR
EDISMDEEDGMIPAAAVERESHQIPLGDFRAPSNAVSELSNVASSSETPRIMLRFKNTSS
PQSAALAVPESRGGLTRSQKREAMISETIKAVDDEQFEDPRTTEGNKAMTLPEPVASTAN
MRTLRSTRARTKEQMKANQAKEDKINQT
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcttccagaccaaagtcttcaagagtcattcaaaaaccacgaggaatatcagct
ctcgccgctaggatccccacctccacaaagcaacagcccagtgtcggtggcaaacgtaaa
gccccgactcctgcgacccacaaaggcacccgacctgtctccccgatatcagtaccctcg
acagttgtctctgtgtcagataatgatgaggatgatgaagatgaattcgaagaagttcct
atacctattgcctcgaacgaagtccaaggcgataatgagaatgaagagggagaaggtgac
gaggatgaagacgaagaagatgacgatggtgtaattcatctggagattggcggagaaact
gcggaagagaaggccaagcgcatgattttggctaagagaaaaaaaccattgacagcaagg
gatagagcattgaggttagaggtccacaaagtgcatgttgtcgctctgttggctagtgcc
agcgtaaggaacaaatggtgtaacaattctctcctaaaagcccgtttgctttctcttctg
ccccatccgctccaagcggctttcaacatccctccttcccgcttccctgatcgagcacaa
cgctctcgcttatttttcgaggctttacaatctctggtcagctggtggtcccagacattt
ttcgatgtgtcggactatgctctaggcttgcgaactcgtccgtgggacgaagtccagggc
attatagagtcaacatccaaagcccacactccctttagcctgccatcttccggccatggt
gacggcgaaaagagcaataaatctgcaagcaaggggaagggcaaagctgctgccaatgaa
gagctatcagatcaacttgcctttggatcgggtgcggagcgtcttcggtcggtcaacagt
cttatgaaaaaagcattgcagcaagaaggatctcgggatgtttcagctcagctatttgta
gctcttgctcgggcatgtgggctaggtgtcagacttgtcacctcacttcaggcagtgcca
tggagagcagaaaaggttacaaccaagaaaaaggctataggagctggtaaaggaggcaga
acgttggcgagcagacagggtttaggagacggagatgaggatgacgatgaggatgaaatg
gaagaagtacccataccaaatgacgaggaaaagtccgtaaccccagaagctggcagtagg
cgattgaaagattcagcagatctctatagattacgaaaatacaagcctccggctcggaag
cttgggacgccaactaaatccaagccgaaggcaagtcaaagccttgcggaccagccgcct
gtcttttgggcagaagtgtttaatagatccgaccaacgttggatacctgtcgaccctgtg
agaggtattatccgaaagaaactcggctatgagcctcccacggacagcgggccggttaga
atgctttatgttgtcgcttttgaggaagacggttacgcccgagacgtgacccttcgatat
accaaaaacttctatgctaaaaccagtaaattgcgggtccctacgaaaccgaacgaacct
cagtggtggagtgatatcgttatgggtttcttacggagaccgcatcatctaaaccgagac
gatatggaagatgcagagctcgaaatgagtcagatgacagagggcatgccaatgcatatg
agtggcttcaaagatcacccaatttatgttcttgaacgccacctcaaacgagatcaagtg
cttaacactacgaatcctgtaggtcgcttcagaggtgaagcagtttatcgtcgttcctca
gttcagaactgcaaaacggctgaaaactggatgcgttctgggcgcaaaataaaagaaggg
caagaacctctgaaatgggtcaaacagagagccgtgacgctgcaaaagcgaagagcgcag
gagctggcaaagcaagaaggcgaggaagtaactcagggactgtatgcggagtggcaaaca
gaggtctacaggcctccacccatcaaagatggtataataccaaggaactcttttggcaat
attgatctatatgtcccgaccatgctccctctcggtgcagtccatctaccttacaagggc
attgccaaagttgccaaagaccttggagtaagttatgcagaggcttgcactggttttgag
ttcaagaagcaacgagccgtgcctatcattaaaggcatcgtggtagcaactgaaaaagaa
caagaagtccttgatgcctacgaagaatctaccatcgctgccgaagagcgtgaacgtatg
aagcgagaagatcgtgctttgaaacgttgggccaagcttgtaaacggtctccggcttcgc
ctgcgtcttcagcaagagtatggctcgaaagatagggtaaatgggacatcttcgaatctt
ttcgaaggaaccggggataagggcgaaacgcaaataaatccccggggaacgagtgcaaga
gaaattttggcagctgcgcagcagcagagcaccaaagattgggaagaaagagttcggaga
gaagacatcagcatggacgaggaggatggtatgatacctgctgcggccgttgagcgcgag
tcacatcagattccactgggcgatttccgcgctcccagtaatgccgtttcggaactcagt
aatgtcgcttcctcgtcggaaacaccgagaatcatgcttcgctttaaaaatacttcctct
ccacaatcagcagctctagccgttcccgaaagtcgaggtggactcactcgttctcaaaag
agggaagcgatgatttcggagacgatcaaagctgttgacgatgaacagtttgaagatcca
cggacaacagaaggaaacaaagcgatgacattaccggaacctgtggcgagcacggctaat
atgcggacgttgaggagcacaagagcaaggacaaaagagcagatgaaggccaaccaggca
aaggaagataaaattaatcagacttag
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