Cryptococcus neoformans var. grubii H99: CNAG_01359
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Entry
CNAG_01359 CDS
T08175
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03020
RNA polymerase
cng03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CNAG_01359
09124 Replication and repair
03420 Nucleotide excision repair
CNAG_01359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cng03021
]
CNAG_01359
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_01359
03400 DNA repair and recombination proteins [BR:
cng03400
]
CNAG_01359
Transcription machinery [BR:
cng03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
CNAG_01359
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CNAG_01359
DNA repair and recombination proteins [BR:
cng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CNAG_01359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
23885083
NCBI-ProteinID:
XP_012048959
UniProt:
J9VQ90
LinkDB
All DBs
Position
5:506014..507361
Genome browser
AA seq
172 aa
AA seq
DB search
MFFLRELTHTILLHPSYFGAQLEDYLRQKLYEDVEGTCSGKHGYIISVITITDIGEGKII
PSTGQAKFKTRYTAIVMKPFKGEVVDAKVVNVNKMGFFAMVGPLQVFVSCHLTHSDMKFD
PSVSPPCYRSNDEIIQKDTKVRIQIVGCRVEANDMFAIGTIKKDYLGQIRDE
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcctgcgagaacttactcatacaatcctacttcatccatcctactttggcgct
cagctcgaagactatcttcgtcagaagctttatgaagatgttgaaggaacgtgtagcggt
aaacatgggtatatcatctcagtcattaccataacagacataggagaagggaagattatc
ccatcgacaggtcaagcaaagtttaagacaaggtataccgccatcgtcatgaagcccttt
aagggtgaagtagtggatgccaaggttgtcaatgtcaataaaatgggcttttttgcgatg
gtcggaccattacaagtgtttgtctcttgtcatcttactcactcggatatgaaattcgac
cccagcgtttcgccgccgtgctatcgctcaaatgacgaaattattcaaaaggataccaaa
gtgcgaatacaaattgtaggttgtagagtagaagcgaatgatatgtttgcgatcggaact
attaagaaggactatcttggtcaaataagagatgaataa
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