Cryptococcus neoformans var. grubii H99: CNAG_01548
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Entry
CNAG_01548 CDS
T08175
Name
(RefSeq) ATP-dependent RNA helicase FAL1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03013
Nucleocytoplasmic transport
cng03015
mRNA surveillance pathway
cng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CNAG_01548
09122 Translation
03013 Nucleocytoplasmic transport
CNAG_01548
03015 mRNA surveillance pathway
CNAG_01548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_01548
03041 Spliceosome [BR:
cng03041
]
CNAG_01548
03009 Ribosome biogenesis [BR:
cng03009
]
CNAG_01548
03012 Translation factors [BR:
cng03012
]
CNAG_01548
Enzymes [BR:
cng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CNAG_01548
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CNAG_01548
mRNA cycle factors
Stress granule specific factors
CNAG_01548
Spliceosome [BR:
cng03041
]
Complex C
Other components
EJC/TREX
CNAG_01548
Ribosome biogenesis [BR:
cng03009
]
Eukaryotic type
90S particles
Helicases
CNAG_01548
Translation factors [BR:
cng03012
]
Eukaryotic type
Initiation factors
eIF-4
CNAG_01548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
23885247
NCBI-ProteinID:
XP_012052366
UniProt:
J9VU05
LinkDB
All DBs
Position
11:complement(255139..256799)
Genome browser
AA seq
396 aa
AA seq
DB search
MAGINVGDDKLVFESSEAVTVAPTFEALNLKEDLLRGIYAYNFEKPSAIQQRAIIPIIRG
RDVIAQAQSGTGKTATFSISMLQSIDTNLRETQALVLSPTRELAVQIQTVVLALGDYMNV
SCHACIGGTSVGEDIRKLEAGQQVVSGTPGRVFDMIRRRNLRTKDIKMLILDESDELLNK
GFKDQIYDIYRYLPPATQVVVVSATLPHDVLEMTTKFMTDPVRILVKRDELTLEGIKQFF
VAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTEKMREANFTVSSMHGEMVQKE
RDAIMAEFRGGQSRVLITTDVWARGIDVQQVSLVINYDLPTSRENYLHRIGRSGRFGRKG
VAINFVTVDDVRILRDIEQYYSTQIDEMPMNVAELT
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggctggtatcaacgttggcgacgacaagctcgtattcgagtcctccgaagccgttacg
gtcgctcctaccttcgaggctctcaacttgaaagaagatctcttgcgcggaatctatgct
tacaacttcgagaaaccttctgccatccagcaacgtgcgatcatccccatcatccgtggt
cgagatgttattgcccaagcccaatctggtaccggtaaaaccgccaccttttctatctca
atgcttcagtccatcgacaccaacttgcgcgagactcaggccttggttctctcccccacc
agggaattggctgtgcagattcaaaccgtcgttctcgcgctcggtgactatatgaacgtc
tcttgtcatgcctgtatcggaggaacgagcgtcggtgaagacattaggaagcttgaggct
gggcagcaggttgtcagtggtactcctggccgagtgtttgacatgatccgaaggagaaac
ttgaggactaaggacatcaagatgctcattcttgatgaatctgatgagctcctcaacaag
ggatttaaggaccagatttacgacatctaccgatacctccctcccgccacccaggtcgtt
gttgtctccgccactctccctcatgacgtcctcgaaatgactaccaagttcatgaccgac
cctgtccgaattctcgtcaagcgtgatgaattgactcttgaaggaatcaagcaattcttt
gtcgccgtcgaaaaggaagactggaagtttgacacgctttgtgatttgtacgacactttg
acgattacgcaagcggtcattttctgtaacacacgacgcaaggttgactggttgacagag
aagatgcgagaggcgaactttactgtcagcagtatgcacggagaaatggtacagaaggaa
cgagatgcgatcatggccgaattccgaggggggcagagtcgagtattaattaccaccgac
gtctgggcccgaggtatcgacgttcagcaagtttctctggtcatcaactatgaccttcct
acttctcgtgaaaactacttgcaccgaataggtcgaagtggtcgattcggcaggaaaggt
gtggcgatcaactttgtcactgttgatgatgtcaggattttgagagatattgagcagtat
tactctactcaaatcgacgaaatgcctatgaacgttgcggagctaacataa
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