Cryptococcus neoformans var. grubii H99: CNAG_01563
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Entry
CNAG_01563 CDS
T08175
Name
(RefSeq) histone deacetylase 6/10
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
cng
Cryptococcus neoformans var. grubii H99
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cng01009
]
CNAG_01563
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_01563
04131 Membrane trafficking [BR:
cng04131
]
CNAG_01563
03036 Chromosome and associated proteins [BR:
cng03036
]
CNAG_01563
Enzymes [BR:
cng01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CNAG_01563
Protein phosphatases and associated proteins [BR:
cng01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CNAG_01563
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
CNAG_01563
Membrane trafficking [BR:
cng04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CNAG_01563
Chromosome and associated proteins [BR:
cng03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
CNAG_01563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2-like
Arb2
DUF1749
Ser_hydrolase
Motif
Other DBs
NCBI-GeneID:
23885262
NCBI-ProteinID:
XP_012052602
UniProt:
J9VU19
LinkDB
All DBs
Position
11:complement(290779..294945)
Genome browser
AA seq
731 aa
AA seq
DB search
MDTPPPVASTSAPPLAAVHTPAATNVFTTPTHTTPITTMPIPGAAARIARTGYIYDPLMM
LHCMEGYMPTAENVMDNSDGHPEDPMRIKRIFTRLAEQGLIRRMKRLDFEEVKFDQVLLV
HGEEMWDKVQATELLSDQQIQAMKEYYDQLSLYVCRETAHCARLSAGGVIQACRSVCKNE
VRNAFAIVRPPGHHAEPNEHMGFCFFNNVAVATREMQREGLAKKVLILDWDVHHGNGTQR
AFWHDGDVLYMSLHRHEGGTFYPNSDFGSLNMVGDGEGVGKSVNIPWPGPGFGDADYIYA
FQRIIMPIAYEFNPDLVIISAGFDAADGDLLGQCHVTPAAYGHMTHMLSSLAGGKLVVAL
EGGYNLRAISDSALAVARVLLGEIPPELGIMRASEAATEVVYQVALEQSKYWKCIDVKAC
EPPEVTELESGTSPVYTIPDLLKIHRAHHMFTKHQLYQIPLASQDLEAAFGGQIICNENM
YEVGEKGVLVVFVHDFGNLRVETDGARSTNIHLANSYLLDTSDAVVSWVKTKGYNIIDVN
ILKQLPTEYPKGPKMVMKQANDMESKLMKYIWDNYIELSECEKVVFIGHGTGCQAIMDLV
NARDVELKVKAVVQVAGLHSLVRPNPSNKEKLSWFKQCNQIYVPAEHVVLEDEKVKRRLG
DAVFTSQKAKVVDVLNDVLPRIKAFVESKVEDGLPPRPHSGPDGLYGLGGGGGGGAGSGE
LVAVNGHVHVG
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggacacccccccccccgtcgcttccacctcggccccgccgctcgccgccgtccacact
cccgccgccacaaacgtcttcaccacccccacccatacaaccccgatcacaaccatgccc
atcccaggtgcagcagcacgcatcgcccgtaccggctacatctacgacccgctcatgatg
ctccattgcatggaaggctacatgcccaccgcagagaatgtaatggataacagtgacggg
cacccggaagatcccatgaggatcaagaggatctttacgaggctggcggagcaagggttg
atcaggagaatgaagcggctggattttgaagaggtcaagtttgatcaagtgttgttggtg
catggcgaggagatgtgggataaagtgcaggcgacagagctgttgagcgatcagcaaatt
caagctatgaaagagtattacgatcagctatccctctacgtctgccgtgaaactgcccat
tgtgctcgtctttctgctggaggtgtgattcaagcatgcagatcagtctgcaagaatgaa
gtgcgtaacgcctttgctatcgtacgtcctccgggccatcatgcagagcccaacgaacat
atgggtttctgtttcttcaataatgttgcagtggctaccagggagatgcagagggaaggg
ctggccaaaaaggtattgatcttggattgggatgtccaccatggtaacggtacacaaaga
gcattctggcatgatggtgatgtactttacatgtcattacatagacatgaaggaggaaca
ttctaccccaacagcgatttcggatctctcaacatggtcggtgatggtgaaggtgtcggc
aagtccgtcaacatcccttggcctggaccgggtttcggtgatgccgactacatctatgct
ttccagcggatcatcatgccaatagcatacgagttcaaccccgatctcgtcatcatttct
gctggattcgatgctgctgacggcgatttgctcggtcaatgccatgtcacccctgcagcg
tacggacatatgacacatatgctcagttcattggctggtggcaagcttgtcgtcgctctt
gaaggcggatacaatctccgagccatctccgattccgccctcgccgtcgcccgtgttctc
ttgggtgaaatcccgcccgagctgggtatcatgcgagcatccgaagcggctaccgaggtg
gtctaccaggtcgcgcttgaacaaagcaagtactggaaatgcatcgatgtaaaggcctgt
gaacctcctgaagtcaccgagcttgagagtggcacttctcccgtgtatacgatccctgac
ctactaaaaatccatcgcgcacaccacatgtttaccaaacaccaattgtaccaaatacca
ttggccagccaagacttggaagctgcattcggcggtcagatcatctgcaatgagaatatg
tatgaagttggagaaaagggggtgttggtcgtgtttgtccatgactttggtaatttgcga
gtggagaccgatggcgcaagatcgaccaacatccatctggcgaacagctaccttcttgat
acgagtgatgcggttgtatcgtgggttaaaacaaaaggttacaacattatcgatgtcaat
atcctaaagcaattacctaccgaatatcctaaaggccccaagatggtcatgaaacaagcc
aacgacatggaatccaagttaatgaagtacatctgggacaattacattgaactgtccgag
tgcgaaaaagtcgtgttcataggacatggtacaggctgtcaagcgatcatggatcttgtc
aatgcgagggatgtcgagctcaaggtgaaggcggtggtccaagtggccggattacattcc
ttggtcaggccaaatccgtcaaataaggaaaagttgagctggttcaagcagtgtaatcaa
atctacgtgcctgccgaacatgtggtattggaggatgaaaaggttaagcggagattaggc
gacgcggtgtttacatcccaaaaagctaaagtcgtcgacgtccttaacgatgtccttccg
cgaatcaaggcctttgtcgaatccaaagtcgaagatggtcttccgccgcgaccgcattcg
ggtccggatgggttgtacggtctaggagggggagggggtgggggtgctgggagtggagag
ttggtggctgttaatggacatgtacatgtgggatga
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