KEGG   Cryptococcus neoformans var. grubii H99: CNAG_01630
Entry
CNAG_01630        CDS       T08175                                 
Name
(RefSeq) polyadenylation factor subunit 2
  KO
K15542  polyadenylation factor subunit 2
Organism
cng  Cryptococcus neoformans var. grubii H99
Pathway
cng03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cng00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    CNAG_01630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cng03019]
    CNAG_01630
Messenger RNA biogenesis [BR:cng03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     CNAG_01630
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd DSE1_N WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_IFT140_1st EIF3I Beta-prop_EML ANAPC4_WD40 WD40_Gbeta Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_EIPR1 eIF2A Beta-prop_TEP1_C Beta-prop_RIG_2nd ASA1 WD40_MABP1-WDR62_1st Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st CFAP251_N Tricorn_2nd Beta-prop_DCAF4 Beta-prop_WDR41 NBCH_WD40 Beta-prop_Vps41 PEP5_VPS11_N Beta-prop_HPS5 Ge1_WD40 WD40_RFWD3 PAC11 B-prop_COPA_B_2nd MIOS_WD40 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 23885326
NCBI-ProteinID: XP_012052651
UniProt: J9W183
LinkDB
Position
11
AA seq 714 aa
MTVPGHPLPGPSNPAANDTWRPSRYLEPLHPDNEEVLEQAAYQAAVTRSSGDDRKRKIKP
RRTVDYQGGVQKWRMLNKLKGIHEFRPAIHPNPSDIVNFLPPVALRSNPSTSICDYWVHT
SINKERSPTRVVRWTPDARRLLTGNDKGQFTLWNGASFNYESITQVHDDSIRSFTYSHNG
QALVSADKGGTIKYFTPHLTNIHGFQGHREACHDVSWSPNDERFVTCGDDGLVKIWSYRE
AKEEKSLSGHGWDVRCVDWHPTKGLIVSGSKDMLVKFWDPRTGKDLSTLHSSKSTINTCR
WSPDGHLVATAGQDSVIRLFDIRTFRELEVLKGHEKEVNCIEWHPIHHSLLVSGDALGTI
NYFSLLSPTPSTPITTLAAAHEDAVFSLSFHPLGHILCSGSKDFTARFWCRARPSGGQEF
DKWHLTEEGAAQKELERITKREWGTNPFPANAANAAVGGGSGSDKQQVALPGLSNLVAAV
NSVKSGPTTIGGGPPGLPGLGAPNAYAGTPPSRVSTPSSMGPPPPGGQGQGQGGQFPRGR
AALPSQNDMLRHNHVPRGGFADRDRNGGGDRGGMDRGMDRDRDSRGGRQDPRGNQMYGRG
PGGPPPGPPGPAPGGYNYPSAPPNYPPYPPSSYPPPPNNQSGYPPAPNYAMPPGPGAPPQ
NYPYNRPPQGPLQNNNPGGQGNYGASASGGYGQYGGGGGGGGGGGGNGGGYGRR
NT seq 2145 nt   +upstreamnt  +downstreamnt
atgacagtccccggccacccgctcccaggcccctcaaaccccgcagcaaacgatacatgg
cgcccgtcccgctacctcgaacccctccacccggacaacgaagaggtcctcgagcaggct
gcctaccaggccgcagtcacccgctccagcggcgacgacagaaagcgcaagataaagccg
aggaggacagtcgactaccagggtggcgtccagaaatggagaatgctgaacaagctcaag
ggcatccacgaattcagaccagccatacatcccaacccatctgacattgtcaacttcctt
ccgcctgtagcacttcgctcaaatccatcgacgtctatatgtgattactgggtccacacc
tcgataaataaagaacgttctccgacccgtgtcgtcagatggacaccagacgcccgtcgt
ctgctcacaggtaatgacaagggccagttcacactctggaacggtgcctctttcaattac
gagtccattactcaagtacacgacgactctatccggtccttcacctactcacacaacggc
caagcgcttgtttcagccgacaaaggcggcaccatcaagtactttacaccgcatctgaca
aatatacacggttttcaggggcatcgagaagcctgtcatgatgttagttggagtccgaac
gatgagcgtttcgtgacctgtggcgatgatggactggtcaagatttggagctatagagaa
gccaaggaagaaaaaagtctgagtggccacggttgggatgtgagatgcgtcgattggcac
cccacaaagggtcttatcgtttccggttccaaagatatgctcgtcaaattctgggaccca
cgaacaggcaaagatctctctaccctccactcttccaaatccaccatcaacacgtgtcga
tggtcccccgatggccatctcgtggcgacagccggccaagattctgtcattcgcctcttt
gacattcgtacctttcgcgagttggaagtcttaaagggccacgaaaaagaagtcaactgc
atcgaatggcacccgatccatcactctctcctagtttccggcgatgctctcggcactatc
aactacttttccctcctttctccaactccatctacaccgatcaccactcttgcagccgcc
catgaggacgcagtattctccctctctttccatccccttggccatattctctgctcggga
tcaaaagactttacagcaagattctggtgtcgtgcgagaccgtcgggcggacaagaattc
gataaatggcatcttaccgaggaaggcgctgcccagaaagaactggagcgtatcacaaag
cgtgaatgggggacgaacccgtttcctgccaacgctgcaaatgctgcagtcggtggcggc
agcggcagcgataagcagcaagtcgctttgcccggcttgtccaacctcgttgctgctgtt
aacagcgtcaagtccggccccacgacgataggcggtgggccccccggtcttccagggctg
ggtgcacccaatgcctatgctggcaccccgccatcgcgcgtatccaccccttcatccatg
ggacctccccctcctggtggccaaggacaaggccaaggcggtcaattcccaagaggaaga
gcagcgcttcccagccagaatgatatgcttcggcataatcacgtcccgcgtggtgggttt
gcagatcgggataggaatgggggaggagatagaggggggatggatagaggtatggataga
gatagagattcacgaggaggaagacaggatccaagaggtaatcagatgtatggacgtggg
ccagggggacctcctcccggtcctccaggaccagcaccaggaggatacaattacccctct
gctcctcccaactatcccccttacccaccttcatcctaccctcctcctcccaacaaccaa
tcaggctatccgcccgcgcccaattatgctatgccccccggacccggtgcgcctcctcaa
aattatccttataatcgacctccacagggacctctgcagaataataatccaggtggtcaa
ggaaattatggcgcttccgcttccggtgggtatggccagtacggcggcggtggtggtggg
ggcgggggtggtgggggtaatggtggagggtacggacgtagatag

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