Cryptococcus neoformans var. grubii H99: CNAG_01630
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Entry
CNAG_01630 CDS
T08175
Name
(RefSeq) polyadenylation factor subunit 2
KO
K15542
polyadenylation factor subunit 2
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CNAG_01630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_01630
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CNAG_01630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
DSE1_N
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
EIF3I
Beta-prop_EML
ANAPC4_WD40
WD40_Gbeta
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_EIPR1
eIF2A
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
ASA1
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
CFAP251_N
Tricorn_2nd
Beta-prop_DCAF4
Beta-prop_WDR41
NBCH_WD40
Beta-prop_Vps41
PEP5_VPS11_N
Beta-prop_HPS5
Ge1_WD40
WD40_RFWD3
PAC11
B-prop_COPA_B_2nd
MIOS_WD40
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
23885326
NCBI-ProteinID:
XP_012052651
UniProt:
J9W183
LinkDB
All DBs
Position
11
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AA seq
714 aa
AA seq
DB search
MTVPGHPLPGPSNPAANDTWRPSRYLEPLHPDNEEVLEQAAYQAAVTRSSGDDRKRKIKP
RRTVDYQGGVQKWRMLNKLKGIHEFRPAIHPNPSDIVNFLPPVALRSNPSTSICDYWVHT
SINKERSPTRVVRWTPDARRLLTGNDKGQFTLWNGASFNYESITQVHDDSIRSFTYSHNG
QALVSADKGGTIKYFTPHLTNIHGFQGHREACHDVSWSPNDERFVTCGDDGLVKIWSYRE
AKEEKSLSGHGWDVRCVDWHPTKGLIVSGSKDMLVKFWDPRTGKDLSTLHSSKSTINTCR
WSPDGHLVATAGQDSVIRLFDIRTFRELEVLKGHEKEVNCIEWHPIHHSLLVSGDALGTI
NYFSLLSPTPSTPITTLAAAHEDAVFSLSFHPLGHILCSGSKDFTARFWCRARPSGGQEF
DKWHLTEEGAAQKELERITKREWGTNPFPANAANAAVGGGSGSDKQQVALPGLSNLVAAV
NSVKSGPTTIGGGPPGLPGLGAPNAYAGTPPSRVSTPSSMGPPPPGGQGQGQGGQFPRGR
AALPSQNDMLRHNHVPRGGFADRDRNGGGDRGGMDRGMDRDRDSRGGRQDPRGNQMYGRG
PGGPPPGPPGPAPGGYNYPSAPPNYPPYPPSSYPPPPNNQSGYPPAPNYAMPPGPGAPPQ
NYPYNRPPQGPLQNNNPGGQGNYGASASGGYGQYGGGGGGGGGGGGNGGGYGRR
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgacagtccccggccacccgctcccaggcccctcaaaccccgcagcaaacgatacatgg
cgcccgtcccgctacctcgaacccctccacccggacaacgaagaggtcctcgagcaggct
gcctaccaggccgcagtcacccgctccagcggcgacgacagaaagcgcaagataaagccg
aggaggacagtcgactaccagggtggcgtccagaaatggagaatgctgaacaagctcaag
ggcatccacgaattcagaccagccatacatcccaacccatctgacattgtcaacttcctt
ccgcctgtagcacttcgctcaaatccatcgacgtctatatgtgattactgggtccacacc
tcgataaataaagaacgttctccgacccgtgtcgtcagatggacaccagacgcccgtcgt
ctgctcacaggtaatgacaagggccagttcacactctggaacggtgcctctttcaattac
gagtccattactcaagtacacgacgactctatccggtccttcacctactcacacaacggc
caagcgcttgtttcagccgacaaaggcggcaccatcaagtactttacaccgcatctgaca
aatatacacggttttcaggggcatcgagaagcctgtcatgatgttagttggagtccgaac
gatgagcgtttcgtgacctgtggcgatgatggactggtcaagatttggagctatagagaa
gccaaggaagaaaaaagtctgagtggccacggttgggatgtgagatgcgtcgattggcac
cccacaaagggtcttatcgtttccggttccaaagatatgctcgtcaaattctgggaccca
cgaacaggcaaagatctctctaccctccactcttccaaatccaccatcaacacgtgtcga
tggtcccccgatggccatctcgtggcgacagccggccaagattctgtcattcgcctcttt
gacattcgtacctttcgcgagttggaagtcttaaagggccacgaaaaagaagtcaactgc
atcgaatggcacccgatccatcactctctcctagtttccggcgatgctctcggcactatc
aactacttttccctcctttctccaactccatctacaccgatcaccactcttgcagccgcc
catgaggacgcagtattctccctctctttccatccccttggccatattctctgctcggga
tcaaaagactttacagcaagattctggtgtcgtgcgagaccgtcgggcggacaagaattc
gataaatggcatcttaccgaggaaggcgctgcccagaaagaactggagcgtatcacaaag
cgtgaatgggggacgaacccgtttcctgccaacgctgcaaatgctgcagtcggtggcggc
agcggcagcgataagcagcaagtcgctttgcccggcttgtccaacctcgttgctgctgtt
aacagcgtcaagtccggccccacgacgataggcggtgggccccccggtcttccagggctg
ggtgcacccaatgcctatgctggcaccccgccatcgcgcgtatccaccccttcatccatg
ggacctccccctcctggtggccaaggacaaggccaaggcggtcaattcccaagaggaaga
gcagcgcttcccagccagaatgatatgcttcggcataatcacgtcccgcgtggtgggttt
gcagatcgggataggaatgggggaggagatagaggggggatggatagaggtatggataga
gatagagattcacgaggaggaagacaggatccaagaggtaatcagatgtatggacgtggg
ccagggggacctcctcccggtcctccaggaccagcaccaggaggatacaattacccctct
gctcctcccaactatcccccttacccaccttcatcctaccctcctcctcccaacaaccaa
tcaggctatccgcccgcgcccaattatgctatgccccccggacccggtgcgcctcctcaa
aattatccttataatcgacctccacagggacctctgcagaataataatccaggtggtcaa
ggaaattatggcgcttccgcttccggtgggtatggccagtacggcggcggtggtggtggg
ggcgggggtggtgggggtaatggtggagggtacggacgtagatag
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integrated database retrieval system