Cryptococcus neoformans var. grubii H99: CNAG_01665
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Entry
CNAG_01665 CDS
T08175
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
cng
Cryptococcus neoformans var. grubii H99
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cng03016
]
CNAG_01665
Enzymes [BR:
cng01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
CNAG_01665
Transfer RNA biogenesis [BR:
cng03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
CNAG_01665
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
PRP21_like_P
TAF4
Motif
Other DBs
NCBI-GeneID:
23885359
NCBI-ProteinID:
XP_012052676
UniProt:
J9VYY2
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Position
11:complement(557086..558305)
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AA seq
333 aa
AA seq
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MSPLPHSIPLYLVNGVATVWDAQTAATLHCVHNVSGLRAGTLPGVAQQNGFLGLPLTLMQ
EEAAYLVTQGIAHLVPLDPSPSPPSEETVKAHTAARIARLKALEEKTREAEAKRQEESRK
AFDKGGEKARLKREARARAQAEKARESGEGQFEEGINAKENITAPIAGSPAKTKTKTKAT
ETKYVPTPGHFHIVPSHPVLSQHPSGSQSITSLPHPLFPFPTTPRQHALLGVFSKLQSLS
YRVGLGPRFGGEWLIYPGDYLRYHAHFTSQVIVRDEPIKPTEIVAWGRLGTGTKKAGLIC
CWDDGKREEGQDNQEEEKEEDVEFYSLEWANFG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctctcccccactccatccccctctaccttgtaaatggtgtcgccaccgtctgg
gacgcacaaactgctgctactctccattgcgtgcacaatgtctccggtttaagagccggc
acactgcccggcgtagcccagcagaatggatttttaggtcttcccctgacattgatgcag
gaagaggcggcatatcttgttactcaaggcatcgcccacctcgttcctcttgaccccagc
ccatctccaccctccgaagaaaccgttaaagcccacacggcagctcgcatcgcgcgtctg
aaagctttagaagaaaaaacaagagaggcggaagcaaagagacaggaagagtcgagaaag
gctttcgataaaggtggagaaaaagcgaggttgaagagggaggcgagagcgagagcgcaa
gcagaaaaggctagagaaagtggggaaggacagtttgaagagggcatcaacgccaaggag
aatatcactgcaccgatagcgggttcaccggcaaagaccaagaccaagaccaaggccacg
gagaccaagtatgtgcctactcctggccacttccacattgtcccctcgcacccggtatta
tctcaacatccatcaggatcacaatctataacatccctcccccaccccctcttccccttc
ccaacgacccctcgccaacatgcccttctcggcgtgttttccaagcttcaatcgctctcg
taccgggtcggacttggtccgcggtttggtggagaatggttaatctatccaggggattac
ttgcggtatcatgcgcattttaccagtcaggtcatcgttcgggatgaacctatcaaaccg
accgagattgtggcgtggggtaggttgggtacagggacgaaaaaagctggattgatttgt
tgctgggatgatggtaagagagaagaggggcaagataaccaggaagaagaaaaagaagag
gatgtggaattctactcgcttgaatgggccaactttggatag
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