Cryptococcus neoformans var. grubii H99: CNAG_01729
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Entry
CNAG_01729 CDS
T08175
Name
(RefSeq) ATP-dependent RNA helicase DHX37/DHR1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
cng
Cryptococcus neoformans var. grubii H99
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cng03009
]
CNAG_01729
Enzymes [BR:
cng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CNAG_01729
Ribosome biogenesis [BR:
cng03009
]
Eukaryotic type
90S particles
Helicases
CNAG_01729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
CDC45
nSTAND3
ResIII
AAA_23
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
23885418
NCBI-ProteinID:
XP_012052714
UniProt:
J9VX25
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All DBs
Position
11:734159..738649
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AA seq
1282 aa
AA seq
DB search
MAGPPVRQRYNAKARGSVAGGSSHKKRKNITKEHTEEDAQDNEADQHGAVFEDPTAGMSS
KKRKRFESYMAKKLKSEQRLETFKLLQSLAPSSSTSASLLSASTLGQNPLNPTSAKERQE
KREDRFVRRGIDRLSKRFGEGDDDSGESENDAPSRKGKGKAKEVMVEIIRDGQAEETEEV
KTTVIPSKGERKAEIKAAEQGKRKGKLPKKAGWNPNLLSTQAPNSSSSEFDSSDSGNDTS
DEEPKKAAEPSPTVEPEPVSETIKSPISAPSAPTVLGGALKKSTDGQVVKPRVEIRRKKG
FVYGMFGRRGIDHREDSDDEDEDSDDEDDDEEDDEMDSNEESSDEEDEEDSEEEGNEEEE
EEEEVAPPKKKRSLGFKDWALKQMGQTSQPSAPDLLAVDTTTTLYKSQPLPAARVGEYIG
PLGQELVMPTTSLLDQSKDSDKSKVRPNITRRPSVSEARMGLPILAEEQSIIESILMHPV
VIICGETGSGKTTQVPQMLYEAGFGYKGSDNPGMVAVTQPRRVAAVSLAERVRSELNFPQ
NSSLVAHQIRYSSTTSPDTAIKFMTDGVLLRELASDFLLSRYSVVVVDEAHERGVNTDVL
VGVLSRVAKLREKLWREGKQGAKPLRIVVMSATLRVSDFAENPTLFSKPPPVIHIAARQH
PVTVHFSRRTVSDYVTEAYKKVSKIHARLPPGGILVFMTGQSEIQALCRKLEKKYGAKKS
SQKTQAINDNSLPPEEREAEEVEFGKDEDLAADVDDGAAESDPEALDTDDEVEGIPGLEF
DEPADAPLHVLPLYSLLPNDQQMLVFKPPPEGHRLVIISTNVAETSLTIPGIRYVVDSGR
AKERHYDPTNGVQSFQVSWISKASASQRAGRAGRTGPGHCYRLYSSALFEDHFEQFSKPE
ILRMPIEGVVLQMKSMNIDAVINFPFPTPPDRAALRRAENLLTNLGALSLPTLTKMINGV
QHKGSAGGQITDLGKAMAGFPVSPRFAKMLAIGTQHDCMSYIIAIVAGMSVGDPFIHEQS
LEVDEEEDEAAEISHIKSEEIKEKEQRKETRRRFFKAQQQFLALGQGTSDMFKLLAAIGA
YEYDPSPAFCAKTFIRLKAMQEIHQLRAQISSIAKVPLSKLLPPNDTQLKVLRQILAAGF
IDQVAVREDLVLKKGVSYESTRGVAYRAVGLGSEPVFIHPSSALFHRAPPDFVVFSEIVR
TSKPWMKGVTKINPAWLPSLGKGLCTFSKPMEMPTKGFARKSVLKDDEREVFVTPHFKDL
GVDLPVMKKKQRREGTRWILVD
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcccaccagttcgccagcggtacaatgcaaaagcaaggggatcagttgccggt
ggatcttcacacaagaagaggaagaacatcaccaaggagcacaccgaggaggacgcccag
gacaacgaagctgaccagcatggtgctgtattcgaagacccgacagcgggcatgtcttca
aagaagcggaagcgttttgaatcttatatggccaaaaagctcaaatcagaacaacgtctc
gaaaccttcaaacttttacaatctctcgctccctcttcctccacatctgcctcactccta
tcggcgtctaccctgggtcaaaaccccctgaatcctactagtgcaaaggaaaggcaggag
aagcgtgaagatcgctttgtgcgcagaggaattgaccgattgtctaaacggtttggagag
ggagacgacgatagtggagaaagtgagaatgatgctcctagtagaaaaggcaagggaaaa
gcaaaggaggtcatggttgaaattattcgggacggacaagctgaagagacagaggaggtc
aaaaccacagtgataccctccaagggtgaacggaaggctgagatcaaagctgctgagcaa
ggcaagaggaagggtaagcttcccaagaaggctggatggaatcccaaccttctttctacg
caagctcctaattcatcatcgtccgagtttgactcgtctgattctgggaatgatacttcc
gatgaagaaccaaaaaaggcagctgaaccttctcccacagttgaaccagagccagtctct
gaaaccattaaatcgccgatatcggccccctctgcccctactgtgctaggcggggctctc
aaaaaatcaaccgatggacaagtcgtgaagccgagagttgaaatacgacgaaaaaagggc
tttgtctatggtatgtttggaagacgagggatagatcacagagaagattcagatgatgag
gatgaagattcagatgatgaggatgatgatgaggaggatgacgagatggatagcaatgaa
gagtccagcgatgaagaagacgaagaagattcggaagaagaaggtaatgaagaggaagaa
gaagaagaagaagtcgctcccccaaaaaagaagagatcacttggtttcaaggattgggca
ctcaaacagatgggtcaaacatcacaaccttctgcacccgatctcctcgcagttgacacg
accacaacattgtacaagtctcaacctttacctgcggccagggtcggtgaatacattggt
cctcttggccaagagcttgtcatgccaacgacgtcccttcttgatcaaagtaaagacagt
gacaagtccaaggtccgtccgaacatcactcgtcgaccttcagtatctgaggcaaggatg
ggattgcctattcttgccgaggagcaatcaatcatcgagtcgattttgatgcatcccgtg
gtcattatctgtggtgagacaggtagtggtaaaacgactcaagtgccccaaatgctttac
gaagctggatttggatacaagggttcagacaatcctggtatggttgccgtcactcagccg
cgtcgtgttgccgccgtgtcacttgctgagcgagttcgttctgagctcaatttcccccaa
aactcatcactcgttgcgcatcaaattcgatattcttccacgacctcacctgataccgcc
atcaagtttatgacggatggtgtccttttgcgagagcttgcgtctgactttttgctcagc
cggtacagcgtggttgttgtcgatgaggcgcacgagcgtggtgtcaatacagatgtcctc
gttggtgtgttgagtagagtcgctaaacttagagaaaaactgtggcgcgagggcaagcaa
ggcgcgaagcccttacgtattgttgtcatgtccgctactcttcgagtctccgactttgcc
gaaaaccccaccttattctccaaacctccccctgtaatccacattgccgccaggcaacat
ccagtcaccgttcacttcagcagacgtaccgtcagtgattatgtaacggaggcgtacaaa
aaagtttccaagatacatgcaagactgccacctggaggtattttggttttcatgactgga
caaagtgagatccaagcattgtgtaggaagttggagaagaaatatggcgccaaaaagtca
tctcaaaagactcaagcaatcaacgataattcgttgcctccagaagagcgcgaagcagag
gaagttgagttcggaaaggatgaagatttggcagcggacgtcgatgatggggccgcagag
agcgatcctgaggcccttgataccgatgacgaggttgaaggtatccctggcctcgagttt
gatgagcctgcagacgctcccctgcatgttcttcctctttactctttattacccaatgat
caacaaatgctcgttttcaaaccgcctcccgagggccataggctcgtcataatctctacc
aatgtggctgagacgtcgcttactattcccggcatccgctatgtcgttgactctggccgc
gccaaagagcgacattatgatcccaccaatggtgtgcaatcattccaagtctcttggatt
tcaaaggcttcggcttctcaacgagccggccgtgccggtcgtacaggaccaggtcattgt
taccgtctctattcatccgctctctttgaagatcactttgagcaattctccaaaccagaa
atcttacggatgcctattgaaggcgtggtcttacaaatgaagagtatgaacattgatgca
gttatcaatttcccattccctactcccccagaccgggcagccctccgacgagcagagaac
cttcttacgaacctcggtgccctttcgcttcctactttgacaaagatgatcaatggcgtg
cagcacaaaggttccgcagggggtcagattacggacctaggcaaagctatggcagggttt
cctgtgtccccgaggttcgccaaaatgcttgctattggtactcaacacgactgcatgtct
tatatcattgctatagttgcgggtatgtcagtgggcgaccccttcatacacgaacagtcg
ctagaggtggatgaagaggaggatgaagccgccgagattagccatattaaaagtgaggaa
atcaaggaaaaggagcagcggaaggagacgagaaggcggttttttaaggcccaacagcaa
ttcctggcgcttgggcagggtaccagcgatatgttcaagcttctcgcggccatcggcgcc
tacgagtacgacccgtcacctgccttctgtgcaaagacttttatccgtctcaaggcaatg
caggagatacatcaacttcgagctcaaatatcgtctatcgccaaagtaccgctttcgaaa
ttacttccgcccaacgacactcagctcaaggtgcttcgtcagatccttgccgccggcttt
attgaccaggtagctgttcgcgaagatctcgtattgaagaaaggtgtctcgtacgagtcc
actcgcggcgtggcttatcgagcagtcggcctcggatctgagcccgtgttcattcatcct
tcatccgcactcttccatcgtgctcctccagactttgtcgttttctctgaaattgtcaga
accagcaaaccatggatgaagggcgtaaccaaaatcaatcctgcctggttacctagcctt
gggaagggcctttgcactttctccaaaccgatggagatgccgacaaaagggtttgctaga
aagagtgttttaaaggacgacgagagagaagtgtttgtcacgccgcatttcaaagacttg
ggagttgatcttccagtgatgaagaaaaaacagagaagagaagggaccaggtggattttg
gtggattga
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