Cryptococcus neoformans var. grubii H99: CNAG_02022
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Entry
CNAG_02022 CDS
T08175
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03020
RNA polymerase
cng03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CNAG_02022
09124 Replication and repair
03420 Nucleotide excision repair
CNAG_02022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cng03021
]
CNAG_02022
03400 DNA repair and recombination proteins [BR:
cng03400
]
CNAG_02022
Transcription machinery [BR:
cng03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
CNAG_02022
DNA repair and recombination proteins [BR:
cng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CNAG_02022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Pico_P2A
Motif
Other DBs
NCBI-GeneID:
23885681
NCBI-ProteinID:
XP_012049882
UniProt:
J9VNG2
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All DBs
Position
6:complement(1410340..1411973)
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AA seq
377 aa
AA seq
DB search
MNGYYDPQQHQSTNIEIPQGPTNQPRLLLRNLNESDATFHLSGVELAYANSLRRVMMADV
PTIAIDQVLFMQNTTPLADEMIAHRLGLIPLISRNVSKGLRYTRDCDCDEGCYYCMVTLR
LKVAFSGNDGEQFMRVTSDMLEVVPSPGGPPPPNPYGPPPELSEEDRIIINNRDPEMGQP
IGKGNPTVPPILIAKMGKGQEIDVLCKAYKGIAKHHAKWSPLSTVAFEYDPYNKLRHTTH
WFETDERAEWPLSSNAAFETPPNPAEPFDYNAVPSTFYFSAESVGSIPVRSVVEQGLDLL
IEGLANVVLGVQKETGGEEEEGEDGAAADGVVGDGMGMGMGGGLVEPNIPVEIGQGQMAM
GSGYGGYGSQQGYGGSW
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaacggatactatgacccccaacaacaccagtcgactaatatcgagatcccgcaaggc
cctacgaatcaaccacgtcttctccttcgtaacctcaatgagtcggacgccactttccat
ctttctggcgtggagctcgcctatgcgaacagtctgagaagagttatgatggccgatgta
cctactatcgccatcgatcaagtcctctttatgcaaaatacaacgccattagcagacgaa
atgattgcccaccgtttgggtctcattcctcttatctcccgtaatgtctcgaagggactt
cgctacactcgagactgtgactgtgacgaaggatgttattactgtatggtaactttgaga
ttaaaggtagctttcagtgggaatgatggagagcagttcatgagggtgacgagtgatatg
ttggaagtggtgccgagtcctggtggccccccccctcccaatccttatggacctccgcct
gaactttcagaagaagatcgcatcatcatcaacaatcgtgatcctgaaatgggccagcct
attggaaagggaaatcccactgtacctccgatattgatcgcaaagatgggcaaagggcag
gagattgatgttttatgcaaggcttataagggtatcgctaagcatcacgccaaatggtct
cccttatcaactgtagcctttgagtacgacccttataacaagcttcgtcatacaacgcat
tggttcgagaccgatgaacgtgcggaatggcctctctcttcaaatgccgcgttcgaaact
cctccaaatcccgcagaaccattcgactacaatgcggtcccgtccacattctacttctcc
gccgaatctgttggttccatccctgtccgttccgtcgtcgaacaaggtctcgatcttctg
atagaaggcctcgcaaacgtcgtgttgggcgtacagaaagagactggtggcgaagaggaa
gaaggggaagatggggctgctgcagatggagttgttggggatgggatgggcatgggcatg
ggagggggtttggtagagccaaatatacctgtggagataggtcaaggtcagatggccatg
ggaagtgggtacggagggtacggatctcagcagggttatggaggttcatggtag
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