Cryptococcus neoformans var. grubii H99: CNAG_02160
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Entry
CNAG_02160 CDS
T08175
Name
(RefSeq) hypothetical protein
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CNAG_02160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cng03400
]
CNAG_02160
Enzymes [BR:
cng01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CNAG_02160
DNA repair and recombination proteins [BR:
cng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
CNAG_02160
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
CNAG_02160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
Motif
Other DBs
NCBI-GeneID:
23885815
NCBI-ProteinID:
XP_012049833
UniProt:
J9VVB8
LinkDB
All DBs
Position
6:complement(1046321..1048947)
Genome browser
AA seq
445 aa
AA seq
DB search
MILAISTQIIQIGKGYGLLIMFLTRSLNLYRSLLTAGRPLVRPLPFTCAIPPTTLLSRTI
SSPRKLSPQKIRYYNAFQREYGNEFKTLKLPTKVVLDGLRDLSSWRQLKIGTAKSVDYRD
ALQAIISYLGPDWEAKKPILEVGELEKIITPENTVTWRMIQNLIEDGVIPELEDLDDSWK
AMIEFHKVQGFGRVKARQYVEEGARSLDDLLSAREGNAQKYKLSEPLTLAVRYHNQMSTM
IPRSEVEEFDKLIKQALHLADPKISYQILGSYRRGESISAEIDVVVWHESFPRWNKNEPR
VRKILSISLMGKIMDQFHRSRLLDQDKIFSSGLKQFSALTTLPTKADAIHRRLNLRICPL
ESLPFFLLMNTGDDRLITILRKKAGDMGYNLNELAMGLPVDDKTSSAVKDGTEFKVKDEA
EIFAKLKLPYLEPSQRSFHKYQDIL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgatattagctatttctactcaaataatacaaattggaaaggggtatggcttactgatc
atgtttctcactcgatcgctcaacctgtaccgctcccttctcactgctggtagacccctc
gtgcggcctttgccctttacttgcgcgatcccgccaacaactctgttgagtcgcactatc
tcctcgcccaggaagctttctccccagaaaatcaggtactacaatgcattccagagggaa
tatggtaatgagttcaaaacattgaaattgccgaccaaagtcgttctcgatgggttgaga
gacctctcatcttggagacagctcaaaattgggacggccaagtcggtcgactatcgagac
gccttacaagctatcatatcctatctcgggcctgactgggaagcgaaaaagccgatactg
gaagtaggggagcttgaaaagattattactccagagaacaccgtgacttggcggatgatt
cagaatcttatcgaggatggcgtcatccccgagttggaagatttggacgacagttggaaa
gctatgattgagtttcacaaggtacaaggctttggcagagtcaaggccagacaatatgtg
gaggaaggggcgcggtcactcgatgacttgttgtcagcaagagaaggtaatgcgcaaaag
tacaagctttccgaacctctaacacttgctgtccggtaccacaaccagatgagcaccatg
attccgcgatctgaagtggaagaatttgacaaattgattaagcaagctcttcacttggct
gatccgaagatcagttaccagattttgggttcttacaggcgaggcgagagcatatctgct
gagatcgatgtcgttgtctggcatgagtcttttcctagatggaataaaaacgagcctcga
gtccggaaaatcctgtccatcagtcttatgggcaagatcatggatcaattccaccgtagt
cggctccttgatcaagacaagatattcagctctggcttgaaacagttttctgctcttact
acccttcccaccaaagccgatgccatccatcgacggcttaacctccgaatctgtcccctc
gagagtttacctttcttcttgctgatgaacactggcgacgacagattgatcaccattttg
agaaagaaggctggggatatgggatataacctgaatgagttggctatgggtctgcctgtc
gatgacaagacctcttccgccgtcaaggatggaaccgagttcaaggtcaaagatgaagcc
gaaatttttgcaaagttgaagctcccatacctcgaaccatctcagagatctttccacaag
taccaggatattttgtag
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