Cryptococcus neoformans var. grubii H99: CNAG_02530
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Entry
CNAG_02530 CDS
T08175
Name
(RefSeq) hypothetical protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CNAG_02530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_02530
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CNAG_02530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Serglycin
Motif
Other DBs
NCBI-GeneID:
23886144
NCBI-ProteinID:
XP_012050212
UniProt:
J9VM25
LinkDB
All DBs
Position
6:71317..74354
Genome browser
AA seq
748 aa
AA seq
DB search
MDIEDDDAFLYGDEPEQQPQSTAQVQAQAQAEAQAQAAKESAISASMAASLAAYGIDASA
AVVEALPENPEDGGVEEEDGGDEDEDEESDEDDVKLVFTGGSSRQLDLRKPQQAPAVVGI
GKWAHASTGAQAPATPSTPQAGQVTGTPTKSSQNVPGQTTEYTPASRPSASATPQPQSVN
ALANPPIAPTSQAPNLQPQPSSISNANGPPTNPNLPPSHLPPVTNPSANPRFDPSNPSGL
IPSSGQSVYDIDLSLFEGSGQPWRQPGAVVSDWFNFGFDEHTFPKWVRYRTEMGENVKSL
AAGGGLGAGPGVGGDTMNQMGMNGMNGMTPQAQAQAAAAAAAAAMQGMGGMGGIMPNQMQ
AQMQQMQQMQQMQQMQQMMAMGGMPGMDLGMMGQMGQMGGMGQMGGMGGMGQMGQMGQIG
ARQGVRPNSNLANNSAAGNALANNANTNTVANSNAGGQEVKQEEGEHVEQPSANPTFAGR
APPPPGRNMNVAPTSSSSGTTAATPNAGAVNPAATTIAAGTANPTAANANANTTANVPTG
PRATGAVPLGPRAGAGVVPTGPKGRFRDKDRVVDAGSAGGGALDYGGGDDVMPASASASA
SNSNAGSGSGMRSTSKRDRERERDKESHSRDSRGRDRARDKDRERERERERERERGEYDE
EGYTSDEKDRERRRRRERSERSDKDKERSDKRKREGGSVSASASLGPGGWEEGEEEEEYV
PRERERERTRRKRSESEEDEGYRRSKRR
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgaggacgatgacgctttcctttatggggatgagcctgaacaacagccacag
tctactgcccaagtacaagcgcaagctcaagctgaagctcaagcacaagcagcaaaagag
agtgcgatcagcgcgtctatggcagcatccctagcggcatacggtatcgacgcctctgcg
gccgttgtcgaagctctccccgaaaatccggaagatggtggtgtcgaagaagaagatgga
ggagatgaggatgaagatgaggaatcggacgaggatgatgtcaagcttgtgtttactgga
gggagttcaaggcagttggatttgaggaaaccacaacaggctccggcggttgttgggatt
gggaaatgggcacatgcgagtacaggtgcacaagcgcctgcgacacctagtacgcctcaa
gctggtcaggttactggtacacccactaaatcaagccaaaacgtccctgggcaaaccacc
gaatatacacccgcatctcgtccttccgcgtctgccacacctcaaccccaatcggtcaac
gcgctggccaatcctcccattgcgcccacctcccaagcacccaacctccaaccgcaacct
tcctcgatttccaacgccaacggccccccgaccaaccccaatcttccgccttcccatcta
cctcccgtgacgaacccctccgccaacccgcgattcgacccatccaacccctctggcctc
atcccttcctctggccagtcagtatacgatatcgatctctccttatttgaaggttccggc
caaccatggcgtcagcccggggcagtagtgagcgattggtttaattttggatttgatgaa
catactttcccgaaatgggtgaggtatcgaaccgagatgggagagaatgtcaagtctctt
gctgctggtggtggtcttggtgccggacccggggtgggaggtgatacgatgaaccagatg
ggtatgaacgggatgaacgggatgaccccgcaagcccaagcccaagcagcggccgcggca
gcagcagcagcgatgcaaggtatgggtggtatgggcggtataatgccgaaccagatgcaa
gcgcagatgcagcaaatgcagcagatgcaacaaatgcagcagatgcagcaaatgatggcg
atgggtggtatgccggggatggatctggggatgatgggccagatggggcagatgggtggg
atgggacagatgggtggaatgggcgggatggggcagatggggcaaatgggccagattggt
gcgagacaaggtgtccgacccaacagcaacctcgccaacaactctgccgccggcaacgcc
cttgcaaacaacgccaacaccaacaccgtcgcaaactcaaatgctggaggacaagaagtg
aaacaagaagaaggcgaacacgtcgagcaaccatctgccaatcccacttttgcggggagg
gcaccaccgcctcctgggaggaatatgaacgttgcgccgacttcttcttcttccggtacg
acggctgctactcccaacgccggggccgtgaacccggctgctacgaccatagcagctggc
actgccaatcccactgccgccaacgccaacgccaacaccaccgccaacgtaccaaccggt
ccacgagcaacaggggccgtccccctcggccctcgcgccggggccggggtggtgcccaca
ggcccgaaaggaaggtttagggataaagatcgggtggtggatgcgggttccgccggtggg
ggcgcgttggattatggtggtggggatgatgtgatgcctgcgtctgcttctgcatctgct
tccaactcgaatgccggctcgggctcggggatgaggagtacgagtaaacgtgatcgggag
agggagagggataaggagagtcacagtcgagatagtagagggagggatcgggcgagagat
aaggatagggaaagggaaagggaaagggaaagggagagggagaggggagaatatgatgaa
gagggatatacttcggatgagaaggatagggagagaaggcgaaggagggagaggagtgaa
cgtagcgacaaggacaaggagcgtagtgataagaggaaacgggaagggggaagcgttagt
gcgagtgcgagtttgggtccgggaggatgggaggaaggtgaggaggaggaagagtatgta
ccacgagaaagggagagggagaggacgaggaggaagagatcggagagtgaggaagacgag
ggatatagaaggagtaagaggagataa
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