Cryptococcus neoformans var. grubii H99: CNAG_02771
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Entry
CNAG_02771 CDS
T08175
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CNAG_02771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cng03400
]
CNAG_02771
DNA repair and recombination proteins [BR:
cng03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
CNAG_02771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ZGRF1-like_N
COE1_HLH
Motif
Other DBs
NCBI-GeneID:
23886330
NCBI-ProteinID:
XP_012047906
UniProt:
J9VKI0
LinkDB
All DBs
Position
3:complement(805103..809884)
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AA seq
1063 aa
AA seq
DB search
MAIGTVKPRRSLGAIIDSIPSQQEYVPDSCSENSGSDSERDAPIPTLKPIPLTPLPSRPT
RLILELGAEPITTGKENEREGARAVPGDGKIDKKVHGVVDTLLMPVLYFAVQWRKPQFKK
HKTWDGDANIKVEGNRIVMLDEDGNQMATTNVGDKVIKPEAEFKIGGYEIMVDHVLQQDQ
FKASTNILNRPRVIPTIKSSGYRPSSFAKPFRPPIQKANPISTKPPTMEIIENEHGQSPI
SSSSKRSIPTPAAAQRAVAASSFYTKQSPKPFNERIVLGEKSNKERLQWGGALFNPHAEG
AVVMPRPGEKLAKLRGTTIVDVVIDPVLGDLLREHQKEGVKFMYSCVMGMTGAEGEGCIL
ADEMGLGKTLQTIALIYTMLKQSPFANQTSIIGKAIIVCPVTLVDNWRKEFKKWVDRRVN
VLVADGTDYRVSSFVNNKHQHVLIIGYERLRKVVKELASCIPPIDLIVCDEGHRLKSKDN
KTTKMFDMLKTQRRIILSGTPVQNDLGEYWAMVNFACPGVLGKYSAFAKHYEKPILKSRT
PNCSAKDVELGRERANDLAKLSKEFVLRRTAAVLENYLPPKYEYVIFIAPSLLQLSVLSN
LLDPNIVRSFIRGYGAQSLALIDLMRKISNSPMLLKRNDNELTRADDDLGSATSAAISAI
PSETNINDVTTSGKMLLLDKMLHSIYQCTQEKVVVVSNWTSTLDLIQGLCKLKRYNYLRL
DGSTPPKQRQDLVDRFNKDQGRQGSFVFLLSAKAGGVGLNLIGGSRLILFDSDWNPSTDL
QAMARIHRDGQKRPVYIYRFLTTNAIDEKIYQRQITKTGLSDQMMDQTRSEKQTSKDSFS
AAELRDIFTLNLQTDGCQTHDLLGCQCIKKPAGKTRDIAEGEHSSKNLPDNASGKSDSDE
NDHPTFVSANKYDPEPTPKMRRKAIQEQKNKLAALKHWAHFDPFEPASFRGIQDSLLYNV
LFDSWETDSTLLSQNIETYGSPAFESPHESDEDDPDSDEEVSVPKKRKSGIPRSAAVLKK
TRAAGEENTGFNQRRYNLRSIAESGGTGRVTFVFEKISKSTIA
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcggaacggtcaagcccagacgtagcctcggtgccatcatagactccattcct
agccaacaggaatatgttcccgattcttgctcagaaaactcgggctccgattcagaacga
gatgctcccattccgactctcaaacctataccactcacacctttgccttccagaccaaca
cgcttgatccttgaactaggggccgaacctataacaacagggaaagagaatgaaagagag
ggggctagagctgtaccaggtgacggcaaaatagataagaaggtccatggggttgtcgac
actttattaatgcctgtcttgtatttcgctgtgcagtggaggaaaccccaatttaagaag
cataaaacttgggatggggatgccaacatcaaggtagaaggcaataggattgtaatgctt
gacgaggatgggaaccaaatggccactaccaatgttggggataaggtgatcaaaccggaa
gccgaatttaagattggcggatatgagatcatggtagaccatgtattacaacaggaccag
ttcaaagctagtaccaatatcctgaacagacctagagttatcccaacaatcaaaagctcc
ggataccgaccttcatcattcgcaaagccctttagaccgccaattcaaaaagcaaatccg
atttcaacaaagccaccaactatggaaattatcgaaaatgagcatggccagtcacccatt
tcctcatcttcaaagcgctccatcccaacgcccgcagccgctcaacgagcagttgctgct
tcatcattttataccaaacaatcacctaaaccattcaatgaaaggattgtattgggagag
aagagcaacaaggagaggttacaatgggggggagcgttatttaaccctcatgctgaaggt
gcagtagtgatgcccaggcctggggaaaagctggctaaattgagaggcacaactatcgtg
gatgtggtgattgaccccgtcttgggggacttattgcgggagcatcagaaagaaggcgtc
aaatttatgtactcttgtgtcatggggatgaccggtgcggaaggcgaaggatgcattctt
gcggatgagatgggtttgggcaagacacttcagaccatagcactcatttacaccatgctg
aagcagtctccctttgccaatcaaacatccattatcggcaaggcgatcattgtgtgtccg
gtaacgttggtggacaattggcgcaaagagttcaagaaatgggtggatagacgagtgaat
gttctagtggccgatggtacagattatagggtatcgtcttttgtcaacaacaagcatcaa
catgtcttgatcatcggttatgaaaggcttcgcaaagtcgtcaaagaacttgcttcatgc
attccgccaattgaccttatcgtgtgtgacgaaggacatcgcctgaaatccaaagacaat
aaaacgactaaaatgttcgatatgctcaaaacccaacgccgtatcattttgtcaggtaca
cccgtgcaaaacgatctaggtgaatattgggcgatggtcaattttgcttgtccgggtgtg
ttgggaaaatattcggctttcgcaaagcattatgaaaagccaatattaaaaagcagaaca
cctaactgttcagcgaaagacgtagagctaggcagggaacgagcaaatgacttagccaag
ctgtccaaggagtttgtcttgcgaaggacagctgcagtgcttgaaaattatttgcctccc
aagtacgagtacgtcatttttatcgccccatcccttcttcaactttctgtcctttcaaac
ctcctcgaccccaatatcgtgaggagcttcatccgaggctatggagcgcagtcattagct
ctaattgatctcatgagaaaaatttccaattctcctatgcttttaaaacgaaatgacaac
gaattaacacgagcagatgatgatttaggctcagccacctcggcagcaatctctgctatc
cctagcgaaaccaacatcaatgacgtgactacgtctggtaagatgctcttgcttgacaaa
atgcttcattccatctaccaatgcactcaagaaaaagtcgttgttgtgtccaactggact
tctactcttgacttgatccaaggattgtgtaaactgaagagatacaactacctcagactt
gatggtagtactccgccgaagcaaaggcaagacttagttgacaggttcaacaaagaccag
ggaagacaaggaagttttgtttttctgcttagtgccaaagctggcggagtgggactcaat
ctaattggtggatcgagattgattttgttcgacagcgattggaacccctccaccgatctc
caagctatggcccggatacatcgcgacgggcaaaagcgcccagtttatatctatcgcttt
ctcacaactaacgccatcgatgagaaaatctatcaacgtcaaattaccaagacgggccta
tcggatcagatgatggatcaaacgcgttcagagaaacaaactagcaaagattctttctca
gcagctgagttgagggacattttcaccctgaatttacaaacggacggttgccaaacgcat
gatttgctgggttgtcagtgcatcaaaaaacctgcaggcaaaacaagggacattgcagaa
ggggagcatagttcaaagaacctgccagataacgcttctgggaaaagtgatagtgacgaa
aacgatcatcccacatttgtcagtgccaataaatatgatcccgaacctactcccaaaatg
cgccgcaaggccattcaagagcagaagaacaagctcgctgcgctgaaacactgggctcat
tttgatccttttgaacccgcatcattccgtggcatccaagactcacttctgtataacgta
ctgttcgattcatgggagactgatagtacccttttatcccaaaacatcgaaacgtatggg
tctccggccttcgagagtccccatgaaagcgatgaggatgaccccgactcagatgaagag
gtgtcggtacccaaaaaacgcaaatctgggataccaagaagcgcagccgtgctgaaaaag
acgagggcagcgggcgaggagaatacggggttcaaccaaagaaggtataatctgagaagc
atcgcggagagtggaggaactgggagagtgacatttgtgtttgagaagatatcaaaaagt
acgatagcctaa
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