Cryptococcus neoformans var. grubii H99: CNAG_02982
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Entry
CNAG_02982 CDS
T08175
Name
(RefSeq) U3 small nucleolar RNA-associated protein 13
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CNAG_02982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cng03009
]
CNAG_02982
Ribosome biogenesis [BR:
cng03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CNAG_02982
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Utp13
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_SCAP
CFAP251_N
DSE1_N
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR41
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_NOL10_N
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_DCAF4
ASA1
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_VPS8
WD40_RFWD3
WD40_like
Beta-prop_WDR75_2nd
Ge1_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
PEP5_VPS11_N
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WDR54
Nop52
TFIIF_alpha
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
23886523
NCBI-ProteinID:
XP_012047819
UniProt:
J9VPS2
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All DBs
Position
3:complement(280910..284218)
Genome browser
AA seq
949 aa
AA seq
DB search
MSGTHSRKSLKFSFRPSPRSIRPIYTGGPVLLTKDGQWIIATMGEEALVTEVQTGLAIAR
IRGDGTPITSLALSYHTSPPTLLTSHMSMTVRYYPLPESAPLTSTPKPPSLTYTRILNKA
HSAPILVSKVSPDNTLLATGSSDGIVKVWDLAGGYVTHLFRGHGGPVSALHFNFPIISGE
ERRRMELLTGSTDSRVRVYDLRDANARVVGGGNAVKPKAVLEGHVSVVRGIDVTPDGKWA
VTGGRDKVVLVWDMLSGETAALAKKGKGKATAGPKLVQTIIAQEQVESLGLLPQEEEVSG
TAKGRWLCYTGGDKGLVRVWDVLKGTQVATMKGVEGVDEAELDEDEQRGVLSVLYSPTSS
SLISIHADQNIIFHSLSTFLSTRQIIGFNDEIVDVAFLSHPSAPATCPSSLPETPDIPHS
HMAVATNSNLLRVYSTSSFNARLLPGHSDMILCLDISPDHQWLVTGSKDHTARVWAPTTC
AEGDGYTWKCIAICEGHAESIGAVAFARKPSDNGHARFLFTASQDRTIKMWDLTPLSTSL
PPSPIRPRSMATLRAHEKDINSLDMAPNDKFLVSGSQDKLVKLYAIDFNPPKVPGEGKGA
EGGFKALGTCAGHRRGVWTVRFSKNDKVVASGSADRTVKLWSLDDFTCLKTFEGHTNSVL
RVDFLSHGQQLVTSASDGLVKLWNIKEEECVKTLDNHEDKIWALAHSSDESTLLSAGADS
LLTIWHDTSLLEQSEANATLIKSVQVEQDFINYVALKDYRRAILLALSMSQPGRLFNLFS
TVVKGRQPDLTEEEQGITGSKEIDEIMKTLPGIELVRLLKFVRDWNANAKMAPVAQVILH
AIFKLRNAEDILAAFEQANRLPKRSEEEEEDEDEEEEKEEGEEKKEKKKKERPSLGAPIS
IKDLLEGLIPYSERHFNRVDKLVQESYMLDYVLGEMEGGLFGEELMDLQ
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaacccactcgcgaaagtctctcaagtttagcttccgaccttctccacggtcc
atccgccctatctatactggcgggcccgttcttcttaccaaggatggccagtggataatc
gccaccatgggggaagaggctttggtcactgaagtgcagactggattggcgatcgctaga
atacgaggggatggcacacccatcacatctctcgcactctcctatcatacttcaccacct
actctcctcacatctcacatgtccatgactgtccgatactaccctcttcctgaatcagca
cccctcacatctactcccaaacccccttcattaacctacacccgtatcctcaacaaagcg
cactcggctcctattctcgtctcaaaagtttcccccgacaacacacttttagctactgga
tcctctgacgggattgtcaaggtctgggatttagccggtggatacgtgacacatctgttc
agaggacatggcggtcccgtttcggcattacacttcaacttccccatcatctctggagaa
gaacgacgacgtatggaacttctcaccgggtcgaccgattctagggtacgggtttatgat
cttcgggatgccaatgctcgagttgtcggtggtgggaatgcggtcaagcctaaagcagtg
ctcgagggtcacgtctcggtcgttagagggattgatgttacccccgatggcaaatgggct
gtcactggtggtcgagacaaggtcgtgcttgtatgggatatgctttcaggggagacagcg
gctttggctaaaaagggtaaaggaaaagcgacagcgggccccaagttggtgcaaactatc
atcgcacaagagcaagtcgaatcattgggtttactgccccaagaagaggaagtttctggt
acagccaaagggagatggctttgctacaccggtggagataaagggttagtgagggtttgg
gacgtcctcaagggaacccaggttgccacaatgaaaggcgtcgaaggggtcgatgaggca
gagttggacgaggacgaacagcgtggcgttctttccgtattatactccccaacctcctca
tccctcatatctatccacgccgatcaaaacatcatcttccattccctttccactttcctt
tcaacacgtcaaattataggtttcaacgacgaaatcgtcgatgtcgccttcctctcccat
ccctccgcaccagccacctgcccctcttcactccccgaaacaccagacattccccactcc
cacatggcagtcgctacaaactccaacctcttgcgagtctactccacatcctcgttcaat
gcgcgacttcttcccggacacagcgatatgatcctctgtcttgacatctcccccgatcac
caatggctcgtcactggttccaaagaccataccgctcgcgtatgggcacctaccacctgc
gcagagggcgacgggtatacatggaaatgcatcgccatctgtgaaggccacgccgagtcg
atcggtgccgtcgcttttgcgcgcaagccttccgacaacggtcacgcccgattcctcttc
actgcgagccaggaccgtaccatcaaaatgtgggatctcacccctctttccacctctctt
cctccatcccctatccgccctcgatcgatggccaccctccgcgcccacgaaaaggatatc
aactcactcgatatggcgcccaacgacaagttcctcgtctctggttctcaagacaagctt
gtcaagctttacgccattgatttcaacccgcccaaagtacctggagaaggaaaaggtgcg
gaaggaggtttcaaggcgttgggtacttgtgcagggcataggagaggtgtatggactgtg
agatttagcaagaatgataaggttgtggcgagcggtagtgccgataggaccgtcaagctt
tggagtttggacgattttacttgtctcaagacttttgagggtcacaccaactctgtgctt
cgagttgactttttgtctcatggtcaacaactcgtaacttctgcgtccgacggattggtg
aagctctggaatatcaaggaagaagaatgtgtcaagacattggataatcacgaagacaag
atctgggcgcttgcacattcatctgacgaatccaccctcctctccgccggcgccgattcc
ctccttaccatctggcacgacacgtccctcctcgaacaatccgaggcaaacgccactctc
atcaaatccgtccaggtcgaacaggatttcatcaactacgtcgctctcaaagactatcgt
cgcgccatcttactcgcactctccatgagtcagcccggacgcctattcaacctcttcagt
accgtcgtcaagggtcgtcagcccgatttgacagaggaagaacaagggatcacgggttcc
aaggaaattgatgagattatgaagactttgcctgggatagagttggtgaggttgttgaag
tttgtgagagactggaatgcgaatgccaagatggcgccggtggcgcaggtgattttgcat
gccatcttcaagttgaggaatgcagaggatatccttgcggcgtttgaacaggccaacagg
ttgcccaagcgttcagaggaggaagaggaggatgaagatgaggaagaggagaaggaggag
ggagaggaaaagaaggagaagaagaagaaggaacgaccatctctcggcgcacctataagc
attaaggatcttctcgaagggcttatcccgtattctgagagacatttcaacagggttgac
aagcttgtgcaggaaagttacatgctggactatgtgcttggcgagatggaaggtgggctg
ttcggtgaggagttaatggacctccaatag
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