Cryptococcus neoformans var. grubii H99: CNAG_03017
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Entry
CNAG_03017 CDS
T08175
Name
(RefSeq) transcription initiation factor TFIIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CNAG_03017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cng03021
]
CNAG_03017
Transcription machinery [BR:
cng03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
CNAG_03017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
DUF6739
Nop14
Motif
Other DBs
NCBI-GeneID:
23886558
NCBI-ProteinID:
XP_012048282
UniProt:
J9VPP1
LinkDB
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Position
3:complement(198586..201359)
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AA seq
768 aa
AA seq
DB search
MSDATLFLRKNKDKQRRRNASGAFRLASTSNSSLASRPGVSKGQPLADPSSSGAPSSAAP
SPSSVSVKPEPDSSNNPNITEIKIFSTGSNSALRYNLMRLNSVKDVDPTQITAPVLMNRK
KPGPKEPPTFALDENGKIVGRYVYDAEGKPVLDEEGQPVVERKEVVDMSLVGQAPGGGRK
KRVKRGTKEVFHQDIEIMRLRREEALPWVLESGNPQDKPAQPEQWVGRMLEQGQLSTVLL
SNDGTRDGFELMPLGRSYKFEPARPFKPLDSDAANKLFELQAKNKIHDRWAFRPADNQSG
EASSAPTPIQVKAEPNELEQRASRMETRIKMLKGVTVDRKAKFERYEDDYQREGHRVERG
MEGGVDEELDFDEAEEFQDDDDNNTFYRDAREEDEAKELEERLKKEFRVANANVGDRPQI
DAEDDEDDLFGDKSLDDEGKKLRKIMRRRMRENGEDYDIDDESDSDSDDESTTSTQNKEK
EKEKDKEKEKAKEKDATRNPSQPPSRPTSRPPTARTSSPSGSNLRYPSPKKGKASTAPPP
VSGASLIAQRATSRGASPRPSTHGGHIAGRASSPLGRAPSPAEGRGPGVTGQSQPASRAT
SPAVRGSSPASGGGAATGGASPASGGPSTRDVSPAPPAGRPSSRKENAAVPSSSSSAKRK
SSPSVSTPSADAPPRPKKHKKTGSLTPAPAPEDIPPFPGMITKQDVLGWFQRNKKKAVPM
NEAIGAFRKRIVDAGPNRDANQKLFLGWIRMVADQENGNLSLKPEFRQ
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgccactctatttcttcgcaaaaacaaggacaaacagcgtcgcaggaacgcc
tctggcgcttttcgactcgccagcaccagcaattcatcgttggcctcgcgacctggcgtc
tcaaagggccaacctctcgctgatccgtcatcctctggagcaccatcttctgctgctcct
tctccatcatctgtttcagtcaagccggagccggatagctccaataatcctaatatcaca
gagatcaaaatcttctccactggttcgaacagcgcattgcgatacaatctcatgcgcctt
aactctgtcaaggatgttgatcccacacagataacggcgcctgtattgatgaacaggaag
aaaccaggtccgaaagaaccccctacttttgcgttggacgaaaatggcaaaatcgttggg
cggtatgtgtacgatgcggagggtaaacctgtcttggacgaggaaggccagcccgtggtt
gagaggaaggaagtggtcgatatgtctcttgtgggacaggcgcccggcggcggcaggaag
aagagggtcaagaggggcacaaaggaggttttccaccaagatatcgaaatcatgcgtctt
cgacgagaggaagctcttccttgggtgttggagagtggtaaccctcaagacaaaccagcc
cagccggaacaatgggtaggacggatgctagagcaaggacagctctctactgtgcttctg
tcaaatgacgggacacgagatgggttcgaattgatgccattgggcagatcctacaaattt
gaaccggctcggccttttaagcctttagactccgatgctgccaacaaactgtttgagttg
caagcaaagaacaagattcacgatcgatgggctttccggcctgcagataatcaaagcggg
gaagcatcctctgcaccgacgcctattcaagtcaaggcggagccaaacgagttggaacag
cgcgcatctaggatggagacgaggatcaagatgctcaagggcgtcactgtcgaccggaaa
gccaagtttgagaggtacgaggatgattatcagcgtgaagggcatcgagtggagcgtggt
atggagggcggtgtggacgaagaactcgatttcgatgaggcggaagagtttcaagatgac
gacgataacaatacattctaccgcgatgcgcgagaagaggatgaggccaaggagttggaa
gaacggctcaaaaaggagtttcgtgtggctaatgccaatgtcggtgaccgacctcagatt
gatgcagaagacgacgaagatgatctctttggagacaagtcacttgatgatgagggtaaa
aagttgaggaagataatgagaaggaggatgagagaaaatggagaggattatgatatagat
gatgagtcggactctgattcggacgatgaatctacaaccagcactcagaacaaggaaaaa
gaaaaggagaaggacaaggaaaaagaaaaagccaaagaaaaggatgctacccgcaaccct
tctcaaccgccttcgcgtcccacttctcgtcctcccaccgctcgcacatcgtcaccttcc
gggtctaatcttcgctacccgagcccgaaaaagggcaaagcctccaccgcccctcctccg
gtctctggcgcgtctctcatcgcccagcgcgccacctcacgaggagctagccctcgtcct
tccactcatggaggacatattgcgggtagagccagtagccctcttggaagggcgcccagt
cccgctgaaggtcgtggtcctggtgtcaccggtcagagtcagcctgcgtcgagggctacg
agtcccgctgtcagagggagcagtcccgcttcgggaggtggtgcagccaccggaggggcc
agtcctgcttctggaggaccatcaacgagggacgtatcccccgctccccctgctggtaga
ccgtcctcgagaaaggaaaacgctgcagtcccatcatcgtcttcgtccgcgaagcgtaag
tcatcaccttccgtttctactccatccgccgatgcacctccccgaccgaaaaaacacaag
aagaccggttctcttaccccagcgccggcaccggaggatatccctccgttccctggtatg
atcaccaagcaggacgttttgggttggttccaacgaaacaagaagaaggctgttcctatg
aatgaggcgattggagcattcagaaagaggattgtggatgctgggcctaatagggatgcc
aaccagaagttgttcttggggtggattaggatggtggctgatcaggagaacgggaacttg
agtttgaagcccgaatttagacagtag
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