Cryptococcus neoformans var. grubii H99: CNAG_03138
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Entry
CNAG_03138 CDS
T08175
Name
(RefSeq) ubiquitin-protein ligase
KO
K10609
cullin 4
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03420
Nucleotide excision repair
cng04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CNAG_03138
09124 Replication and repair
03420 Nucleotide excision repair
CNAG_03138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cng04121
]
CNAG_03138
03400 DNA repair and recombination proteins [BR:
cng03400
]
CNAG_03138
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cng04147
]
CNAG_03138
Ubiquitin system [BR:
cng04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
CNAG_03138
DNA repair and recombination proteins [BR:
cng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
CNAG_03138
TCR (transcription coupled repair) factors
Cul4-CSA complex
CNAG_03138
Exosome [BR:
cng04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CNAG_03138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
MTaX1
MarR_2
Sulfolobus_pRN
Motif
Other DBs
NCBI-GeneID:
23886664
NCBI-ProteinID:
XP_012050846
UniProt:
J9VUS5
LinkDB
All DBs
Position
8:complement(160950..164207)
Genome browser
AA seq
811 aa
AA seq
DB search
MSSLVVFPSTTNAFSSYRPSVRAHVDFIKPGSGSQHSTGRIVKLELPSLVQPQAKDQLEP
LFESIDAILAGQPTPLSYQHITAFCQTVVLQDRDAASRLSDKCTSSIDQYTERIRRELKG
GILAKDRNTLGKLCESWQVWTARTNLLSSLLVHLDKVYHSSFSDPNILRSRAIAKFKSIV
WQDTVIHAVIIDDIFKWLSEERQTGTPSRARPTILAVDKIAQTLQTFGELAVAYQDETHE
YYTSALRNAVSEIEQGNRKAGEYASWFLAKMVEEEDRVRECFHTFSRQLLSRDLRKVGQS
ETTDKVIELAVKEAMGNDEAKGFSELYQFSIEIDKFASLVKSLENYLANRVSTLISDPAN
DPRMIDEILKLRRFAEKTVSNLFSEEDTEPLPADEDVKMISVEEKEEREKEKEAAMEKRH
SVRMRMFELEEAVRTGFKTGMGSRQNAPAEWIAKHLDAAMRKGQGSGTEEQFNHHLDEIV
TLVGFTKDKDVFKAFYSSQLAKRLLLNKSASNDQEKIMVAKLQKELGEEFTSGDVMMKDL
QLSETLVRSYQLAQSRDPAQYGETSNFTANVLTESAWPAYPLLKDGWNFHLTPTLQSSID
AFTSWYTTQHKNRVLSWRYQLATVTLTARFPSGRYEVGVSLFQAVVLLLYNEVESLTFAE
IKERTGIEKNELVRTLQSLALGRKGTRVLLKKPSGKEVNPTDIFTWNKGFTSERIKFKIN
QIQQDMSAEESRKTNEQVALDRVSILEATIVRIMKARKKLTLQLLIDGVVSDVSKRFPPD
VKEIKKRVESLIEREFMARDEEDRSILHYVA
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccttgtggtgttcccgtcgacgacaaacgcattcagttcttataggccaagt
gtcagagcgcatgtcgactttatcaagcccgggagtggcagtcagcactccacaggtcgc
atcgtaaagctcgagttaccttctttggtccagccacaggccaaggatcaacttgagcca
ctattcgaatcaatcgacgcaatattggcaggccaaccaaccccattaagctatcaacac
atcactgcattctgtcagactgtggtccttcaagatcgggatgctgcctctcgactttcc
gacaagtgtaccagctctattgaccaatacacggaaaggattcgcagagaattaaaagga
ggtattttggccaaagacaggaatacattgggaaaattatgtgaaagctggcaagtttgg
actgcgagaacgaatcttctcagctcattactggttcaccttgacaaagtttatcatagt
tcattttctgaccctaatatcttgcgatccagagcgattgccaaattcaagtccatcgtc
tggcaagacactgtaatacatgcggtgattatcgatgacattttcaaatggctctcagaa
gaaagacaaaccggaactccctcgcgcgcccgacccacgattctggccgtagacaaaatt
gcgcagaccctccagacattcggcgaactcgctgttgcttaccaagatgagacgcacgaa
tattacacatccgctttgagaaacgctgtctctgaaattgagcagggtaaccgaaaggcc
ggagaatatgcctcctggtttcttgccaagatggtcgaagaggaagatcgggtacgcgag
tgtttccatacgttttcacgccaactactgtcacgcgacttgagaaaagtgggtcagtct
gaaacgaccgacaaagtgattgagttggccgtaaaagaagctatgggcaacgacgaagca
aaggggttctcggaattgtaccaattttccatcgaaattgataaattcgcttctctcgtc
aaatctctcgaaaactacctcgccaacagagtttccacactcatttccgacccagctaat
gatccacgtatgatcgacgagatccttaaactcagacgtttcgccgaaaagactgtttcc
aacctcttttccgaggaagacaccgaacctcttccagcagatgaagatgtgaagatgatt
tcggttgaggagaaagaggagagagaaaaagagaaggaggctgcaatggaaaagaggcac
agcgtgagaatgagaatgtttgaactcgaagaagctgtcagaacgggcttcaaaactgga
atgggtagtcgacaaaatgcccctgccgagtggattgccaagcatctcgatgccgccatg
cgtaaaggtcaaggatccggcactgaagaacagtttaaccaccacttggatgagattgtc
actctggttgggtttaccaaagacaaagatgtgttcaaggcattttactcgagtcagctg
gccaagagattgttattgaataagagtgcaagtaatgatcaggaaaaaatcatggtggca
aaacttcaaaaggagctgggagaagaattcacgtccggagatgtgatgatgaaggacctt
caactttcagaaacactcgtacgatcataccaactggcacagtccagagatccggcacag
tatggcgagacatccaactttaccgcgaacgtactcaccgaatctgcatggcctgcttac
cccctcctcaaagacgggtggaacttccacctcacaccaacccttcaatcctcaatcgac
gctttcacctcctggtacaccactcaacacaagaatcgtgtcctctcgtggcgataccag
cttgcaacagttacgcttactgcccgattccccagtggacggtatgaagtcggagtcagt
ctattccaagcggtcgtgctccttctgtataatgaggttgaaagcttgacatttgcggaa
attaaggagaggacgggtatcgagaaaaatgaattggtcaggactcttcaatcgttggcg
ctaggtagaaaaggtactcgagttcttcttaagaaaccctccggcaaggaggtcaaccct
acagatatctttacttggaacaagggcttcacgagcgagcgcattaaattcaagattaat
cagatccaacaggatatgtctgccgaagaatctcgcaagacaaacgaacaagtcgctctc
gacagggtgtccatcctcgaagccaccattgtccggatcatgaaagcccgaaagaagctt
actcttcagctgttgatcgatggcgtcgttagcgacgtctcaaaaaggtttccgccggat
gtcaaggagattaagaagagggtggaaagcttgattgaacgagaattcatggcccgagac
gaggaagatcgatctattcttcattatgttgcctaa
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