Cryptococcus neoformans var. grubii H99: CNAG_03222
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Entry
CNAG_03222 CDS
T08175
Name
(RefSeq) RNA lariat debranching enzyme
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
cng
Cryptococcus neoformans var. grubii H99
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cng03041
]
CNAG_03222
03009 Ribosome biogenesis [BR:
cng03009
]
CNAG_03222
Spliceosome [BR:
cng03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
CNAG_03222
Ribosome biogenesis [BR:
cng03009
]
Eukaryotic type
90S particles
RNase
CNAG_03222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Motif
Other DBs
NCBI-GeneID:
23886740
NCBI-ProteinID:
XP_012050878
UniProt:
J9VPR4
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All DBs
Position
8:381001..383875
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AA seq
605 aa
AA seq
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MRIAIQGCSHGSLAQIYDVVNYYSSQTKNPIDLLLLCGDFQALRSKHDYASLAVPAKFKQ
LGSFHQYYSGERVAPVLTIVIGGNHEASNYMWELYHGGWLAPSIYYLGAAGSVYVNGVRI
VGASGIYKGFDYRKGHFEKVPYNDKELRSVYHIREYDVEKLMHLTPSPSTIFLSHDWPTT
IAHHGNKNALLKRKPFFRDEIEKNTLGSPPLLRLMNHFQPSYWFSAHLHVKFAALYEHQA
PNHGPDVDGGAPLPLLATSAVIAQAGGNPDEIQIDEEMDAGNPDEIIVEDEGEEVIIRPR
QVNPDEIAMDDDEFDDPAPAVPQPLPATTNSAFNPEEIIISDQEFDAPTTVSQPLQPLPP
TKTNASNPEEIAISDDEFDDPAPLAQSLTTIDESTDLIAQSRSNPSHPPVAGTIAPPTSD
SIASRVMQEARQEQQKWELHGGKGMEGVTKFLALDKCGPGKDHMQFLEIPDPSPPPIPGP
PRLTYDPEWLAISRAFHPYLSTSYQPIPLPSSDILEQMVKDEVARIKEEGLLVPTVPQDG
AVEGQEGLVWEKGKVDVGRVQRFWWTAPPEGHPGGNDTAWYTNPQTEAFCGMLGVQNKIN
PPVNR
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcgctatccagggctgttcccatggcagtctcgcccagatatacgacgttgtc
aactactactcctcccaaacaaagaaccctatagacctcttgctcctctgtggcgacttc
caagctctgcgatcaaaacatgattatgcctctcttgccgtaccagctaaattcaagcag
cttgggtcattccatcagtattactctggtgaacgtgtcgcacctgtcttgacaatagtg
atcggaggcaaccacgaggcgagtaattatatgtgggagttgtaccacggtggatggcta
gctcctagtatatattacctcggagcggctggtagtgtttatgtgaatggggtgaggatt
gtgggtgcgagtgggatttataagggattcgactaccgaaagggtcactttgaaaaggtg
ccttacaatgataaggagctgagaagtgtataccatatacgcgagtacgatgtggaaaag
ctcatgcatttaacaccaagtcctagcaccatcttcttatctcacgactggcccaccaca
atagcgcatcatggtaacaagaacgcattgctcaaacgcaagcccttctttcgagacgaa
attgaaaagaacacacttggttcaccgcccctcttaagactaatgaaccatttccaaccc
tcttactggttctcagcccatctacacgtcaagtttgcagctctgtacgagcatcaagcc
cctaatcatggtccggatgtcgacggtggcgcccccttaccattactggcaacgtcggcc
gtaatagctcaggctggtggtaacccagatgagattcaaatcgatgaagagatggatgcg
gggaaccccgatgagattattgttgaggatgagggtgaagaggttatcattagaccgaga
caggtcaacccggatgagattgcgatggatgacgatgagtttgacgaccctgcgcccgcg
gtccctcagccattaccagcgacgaccaatagcgccttcaatccagaagaaataatcata
tcggaccaagagttcgatgcaccaaccacagtctctcaaccccttcaacctctcccacct
accaaaacgaacgcctccaaccctgaagaaatagccatctcggacgacgaattcgatgac
cctgctcctttggcgcaatccctcaccacaattgatgaatcgaccgacctcatcgcgcaa
tcacgttctaacccatcccatccacctgttgctggcaccatagcccctcccacttctgac
tctattgcatcacgtgtaatgcaagaagcgcgacaagagcagcagaaatgggaactgcac
ggggggaaagggatggagggtgtgaccaagtttttggcattggacaagtgtgggcctggt
aaagaccatatgcagttccttgagatcccagacccttccccacccccaatcccagggcct
ccaagattaacttacgatcccgaatggctagccatatcccgtgctttccatccatacctc
tcaacctcatatcagcccatccccctcccatcctctgacatacttgagcagatggtgaag
gatgaagtagcaaggatcaaggaggaaggattgctcgttcccaccgttccacaagatggt
gcggtcgagggacaagaaggattagtatgggaaaagggcaaagtggatgtcggaagagtg
caaaggttttggtggactgcaccacctgaaggacatccgggtggaaatgacactgcgtgg
tatacaaacccgcagacagaggcgttttgtggcatgttgggtgttcagaacaagattaat
cctcccgtgaacagataa
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