KEGG   Cryptococcus neoformans var. grubii H99: CNAG_03345
Entry
CNAG_03345        CDS       T08175                                 
Name
(RefSeq) hypothetical protein
  KO
K18748  protein SSD1
Organism
cng  Cryptococcus neoformans var. grubii H99
Brite
KEGG Orthology (KO) [BR:cng00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cng03019]
    CNAG_03345
Messenger RNA biogenesis [BR:cng03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Other mRNA localization factors
     CNAG_03345
SSDB
Motif
Pfam: RNB OB_Dis3 Dis3l2_C_term CSD2 Rrp44_CSD1 Rrp44_S1 OB_HELZ2
Other DBs
NCBI-GeneID: 23886856
NCBI-ProteinID: XP_012050922
UniProt: J9VXY1
LinkDB
Position
8:complement(696583..704402)
AA seq 1670 aa
MADPLSPAPDHQSQATLAPPVHPSRPSSANSQKSNSSRSRGKNANGGSSNMSRTNSNTSG
QSDSGRSDKKRQSGPTTTISGGVSLGVSGEAPQQNKKGKGKGKNQDKEKEGEKKGASMEV
EKPQKNSSQKGKRSASGRKPHPINTNESSRTVSRNSEHENMPADAGSSQPAPGPKSIHAP
VSAPRTAIEAAVEAATKKHRSQTGGDALASLQKMISDLKTLPATSGPGSGSSAGSRSTSV
TRDPPSTSSAKAEPVAIPSALNSGSHKALKADAPTFTPSFQSFSPVASTSGLSVSPNNTM
PTLAQLHPRSQSQSNGAHHRRNSASSMSSVNFAPPFNPSPIQAFGNPLPPFYQTPLSVHA
EADDESLSPLSFAQHATFQYQQQQLLAAQQQQYQYIQLLQAQLAASQLAHQQAQQAAQHQ
NQQMGNFIAPRFQALAAQRAASQQQQQASQLAQAQQVFELQQAQLLQQQEEATRASVRAA
AEAAHPQNQPVFEEESPELQPHTVGTSGRPQLAPAFTFGAKPKHGVTESVSERGSGRESL
SPPQSSLSPIVVNRSEGIGGAAATGLAGLAARAHKRTGSEMSSVLQQQFAIQQEIEALQA
KQKALMQQDLAQQGDSPLAQLNTAYAQKQTPSQNLSRHRRVQSSLPSASVPVDFEREQDQ
PRSMKSVGEMLPPPIPSGHGRRHSVNVLNKTAGSGMGFGLADDIPEGVVAPSGHRRSGSR
SGLESGSWRLGASSGNAQSSQSQVADLAAAQAQLQSLAQFRAAAGGGHSKMASFSFPNML
PNLLAATTLQAPVGQSLWQQQQAFQMQLQQTTQGPQRKSLFAPYLPQASLPPLLQAGKLV
VGVLRVNKKNRSDAYVATDVLDADIYICGSKDRNRALEGDIVAVELLDVDEVWSTKKDKE
EKKRKKEENATYDLKPSTVKKLEKKKDDVEVEGQGLTLFDDEEVNDDTKPTYAGHVVAVV
ERMPGQLFSGQLGVLRPSSAATKEKQELERREREGDKARKEEPEARPKIVWFKPTDKRVP
LIAIPTEQAPADFIDNPDAYSNKLFVATIKRWPITSLHPFGTLVEELGAIGNSEVETSAL
LKDCNFPTEEFSEMTMKCLPPMPWSVPEREYDVRTDLREERVFTIDPPHSKDLDDALSFK
DNKDGTFTVGVHIADVSFFVKTNTQLDREARKRATSVYLVQRVVPMFPPLLSEDLCSLIP
DYERLTFSAIFTVDEEGNVLQKKFAKTIVKSCAKLTYDDALTVVKGGALPRSKTSGTHLA
TDIERDIKSLHSIANKMRARRIENGAMVVSSSKVSFEFDAQGRPVDCRTYQKGEESAIVE
EFMLLTNQSAARIIANALPEQALLRRHEAPSERRLESFVARATKLGFDMDATSAGTLQKS
FDNVLDNDSALCIDLLRKKVIQRARYFCAGMLDIAKYAHWGLNTPLYTHFTSPIRRYADV
LVHRMVDACLTSPNPNEVKFLMDRDQVAKAAQQCNMKKQSAKLAEEQSVHLFLCILIDDL
TEHYGPVVREARVTNVLETAFDVIIPEFGVEKRVHVDKMPVETAVYDEHRDILSLYWTTK
DVISHLADTTEDRRLLKIKSLGEQRALGSSTSQPTDDTALFDGNSPAVVSKQYAKSAHPS
ALKFEGLRSVDGGHKVQDIKELMSLPVIITSDMTKSPPVLVVYACNPYAT
NT seq 5013 nt   +upstreamnt  +downstreamnt
atggccgaccctttgtccccagctcccgatcatcagtctcaagccacccttgcgccgccg
gtccatccttctcgtccaagttctgcaaactctcaaaagagtaattcttctaggagtcgt
ggtaaaaatgcaaatggaggatcatctaatatgtcgcgaaccaattcaaacacttctggt
cagtcagacagtgggcgaagcgataaaaagagacagagcggccccacaaccacaatcagc
ggtggtgtgagtttgggtgtgagtggagaggcacctcagcaaaataagaaagggaaagga
aagggaaagaaccaggataaggagaaggaaggcgagaaaaaaggcgcctcaatggaggtt
gaaaaacctcagaaaaacagcagtcagaaagggaaaaggtcagcctcggggagaaaaccg
catcctatcaatacaaacgaatcctcgcgtactgtgtcacgaaactcagagcatgaaaac
atgccggcggatgcaggttcgtcgcagcctgcacccgggccgaaatctatccacgccccc
gtgtctgctccacgaactgcaattgaagccgcggtggaggctgcgaccaagaagcacaga
tcacaaacgggtggtgatgctcttgcgagcttgcagaagatgatttctgatttaaagacc
ctacctgccacctctggacctggaagtgggagttctgccggatcgaggtcgactagtgtc
acccgggatcctccctccacttcttcggctaaagcagagccagtcgctattcctagtgct
ctgaactcgggatctcacaaggccctgaaggccgatgcgcctacgttcaccccttccttt
caatcattctctccggttgcctcaacatcaggtctttcagtctctcccaataacaccatg
ccgacactcgcccagttgcatcctcgctctcaatctcaaagtaacggggctcatcatcgc
agaaattctgcaagctccatgtcaagcgtgaactttgccccgcccttcaatccatcgcct
atccaggcctttgggaaccctcttcctccattctaccagacgccgttatcagtccacgcc
gaagcggacgacgaaagcctttcaccattatctttcgcacagcatgctaccttccaatat
caacaacagcagcttcttgcagctcagcaacagcagtatcagtacattcaacttcttcaa
gcacagctcgccgctagtcaacttgcgcatcagcaagctcagcaagctgcacagcaccag
aaccagcaaatggggaacttcattgctccccgtttccaagcgcttgcagctcaaagagct
gcctctcagcaacagcagcaagcctctcagcttgcacaggcccaacaggtattcgagctt
caacaagctcagttgcttcaacaacaggaggaagctactcgggcatccgtccgcgctgct
gcggaagcggctcatcctcagaatcagcctgtattcgaagaggaatcgccggaactccaa
ccccataccgttggaacatccggtagacctcagcttgctcctgccttcacctttggagct
aagccgaagcatggcgtgacggaaagtgtgtcggaacgaggttccggaagagaatcgttg
tcgcctccccagagcagtctgtcgcctattgtggtgaaccgaagcgaaggtattggaggt
gccgctgccactggacttgcaggcctggctgctagagcacacaaaagaactgggagtgaa
atgtcatcagttttacagcagcagtttgccatacaacaagagatcgaggccctccaagct
aagcagaaagccctcatgcaacaggatctggcccagcaaggcgacagccctcttgcgcaa
ctgaacactgcatacgcacagaagcaaacgccttctcagaacctttcccgccatcgtcgt
gtacaatcaagcttgccttcggcttcagttcctgtcgattttgaacgcgaacaagaccaa
cctcgttcaatgaagtctgtcggcgaaatgctccctccacctataccatcgggtcacgga
aggcgccatagcgtcaacgttctcaataagactgccggctctggtatgggtttcggtttg
gcggatgacattcctgagggtgttgtggctccctctgggcatcgtcgatccggcagccga
tcgggacttgagagcggcagttggcgccttggtgcatcgtcgggcaatgctcagagtagt
cagagccaagttgctgaccttgctgcggcgcaagcccagcttcagtctctggcacaattc
cgggcagctgctggtgggggacactccaagatggcttcgttcagcttccccaatatgtta
ccaaacttgcttgccgcaactactttgcaggcaccggttggccaatctctctggcaacaa
cagcaggcatttcagatgcagttgcagcaaacaactcagggtcctcaacgcaaatctctc
tttgcaccctatctcccccaagcatcattaccaccccttcttcaggccggtaaactcgtc
gttggcgtactgagagtcaataagaaaaatcgttccgacgcctatgttgctacagacgtt
ttggatgccgatatatacatctgtggctcaaaagacaggaacagggcgcttgaaggtgac
attgtcgctgttgaattgctggacgttgatgaggtgtggagcacaaagaaggataaggag
gagaagaagaggaagaaggaggagaacgcgacatatgatctgaaaccctcgactgtgaaa
aagctcgaaaagaaaaaggatgatgtggaagtcgagggtcagggcttgaccttgtttgac
gatgaagaagtaaatgacgacacaaagcctacttatgctggtcacgtcgtggctgtggtt
gagcgaatgcccggccagttattctccggacagcttggcgttcttcgtccatcctcagct
gccacaaaagaaaagcaagagcttgaacgtcgcgaaagggagggcgacaaagctaggaag
gaagagcctgaggcccgcccgaagattgtctggttcaagccgaccgataagcgagtgcca
ttaattgccattcctactgaacaagctcccgccgatttcatcgacaacccggacgcatac
agcaacaagctcttcgtggctacaattaagcgatggcccatcacctcacttcatcctttc
ggcactcttgtggaagagcttggagccatcggcaactctgaagttgagacaagtgctttg
ttgaaggattgtaacttccccactgaggagttctctgagatgaccatgaaatgtttgcca
cctatgccatggagcgtcccagagcgagagtacgatgtccgaacggatttgagggaggaa
agagtcttcacaattgacccaccccactcaaaggatttagacgacgctctttctttcaag
gataataaagatggaacgtttactgttggtgtccacatcgcagatgtatccttctttgtc
aaaaccaacactcaacttgatcgggaagctcgtaaacgtgctaccagcgtttacttagtt
cagcgcgttgttccgatgttccctcctttgctatccgaagatctctgcagtcttattcca
gattatgaacgactcacgttctccgcaatcttcaccgtggacgaggaaggcaatgttctg
caaaagaagtttgcgaaaaccatcgtaaaatcttgcgccaaattgacctatgacgacgct
cttactgttgtaaagggtggtgccttacctcggtccaagacttccggtacacatttagct
actgatattgagagagatatcaagtccttgcactccattgccaacaaaatgcgggccaga
cgaatcgagaatggggcgatggttgttagctcatcaaaagtatcgttcgagtttgatgct
caaggtcgcccagtcgactgccggacgtatcaaaagggtgaagagtccgctatcgtggaa
gaattcatgcttctcacaaaccagtcggccgctcgcattatcgcaaacgcccttccagag
caagctcttcttcgtcgccatgaggccccatcggagcgcaggctggaatcttttgtcgct
cgagctaccaagcttggctttgatatggatgctacgagtgctggaaccttgcaaaagtca
tttgataatgtgctagacaatgattctgccctttgcattgatcttttgaggaaaaaggtt
atacaaagagctcgatacttttgcgctggtatgctggatattgcaaaatacgctcattgg
ggtctgaacactccgttatatactcattttacctctcccatccgtcgctatgccgacgtc
ctcgtccaccgcatggttgatgcatgcttgacaagtcccaatcctaacgaagtaaaattc
cttatggacagggatcaagtcgccaaggcagctcaacaatgtaatatgaagaagcagagc
gccaagctggccgaagaacaatcagttcatctctttctttgtattctcattgatgatttg
acggaacactacggccctgttgtccgcgaagctagggtgacaaacgttctggagactgca
ttcgatgtaatcattcccgagttcggcgttgaaaaaagggtacatgtagacaagatgccc
gtggagactgctgtctacgatgagcatcgggatatcctatcgctatactggacaacgaag
gacgttatctctcaccttgccgataccaccgaggacagacgcttattgaagattaagtcc
cttggagaacaacgtgcgcttggatcctctacttcccagcctaccgatgacactgctttg
ttcgatggcaacagccctgccgtggtttctaaacagtatgcgaagtcagcccacccttcg
gcactcaaatttgaggggctccgctctgtagatggaggtcacaaggttcaggatatcaag
gagttgatgagtctgccggtcatcattaccagtgacatgactaagagtccacctgttttg
gttgtgtatgcttgtaatccgtacgcgacataa

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