Cryptococcus neoformans var. grubii H99: CNAG_03554
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Entry
CNAG_03554 CDS
T08175
Name
(RefSeq) coatomer protein complex, subunit alpha (xenin)
KO
K05236
coatomer subunit alpha
Organism
cng
Cryptococcus neoformans var. grubii H99
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cng04131
]
CNAG_03554
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cng04147
]
CNAG_03554
Membrane trafficking [BR:
cng04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
CNAG_03554
Exosome [BR:
cng04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CNAG_03554
Exosomal proteins of bladder cancer cells
CNAG_03554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
TPR_COPA_B
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
EIF3I
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EIPR1
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT122_1st
Aa-Ago_N
Motif
Other DBs
NCBI-GeneID:
23887043
NCBI-ProteinID:
XP_012051334
UniProt:
J9VR74
LinkDB
All DBs
Position
8:1263613..1268065
Genome browser
AA seq
1222 aa
AA seq
DB search
MQMLTKFESKSPRVKGIAFHPKQPLLAASLHNGTIQLWNYQMGTLVDRYDEHDGPVRGIC
FHPTQPIFCSGGDDYKIKVWNYKQRKCLFTLTGHLDYVRTVFFHREYPWIISASDDQTIR
IWNWQSRTCIAILTGHNHYIMCAQFHPWDDLVISASMDLTVRVWDISGLRKKNQASQAPM
SAEEQIARASQGQADLFGNTDAVVKYVLEGHDRGVNWASFHPTLPLIVSCGDDRQVKLWR
MSETKAWEVDSCRGHFNNVSMTMFHPKHELILSASEDKTIRAWDMTKRTAVQTFRREHDR
FWVLTAHPELNLFAAGHDNGLIVFKLERERPPFSLSGNQLFYIKDKVVRMADISSGNSQG
ICSVRKFGSQYIPPRTLSYNPAERAVIVTSPSDNGIYELITLPKSTAPTAQDGRDVPSDG
KKGTGFCALFVARNRFAVLDKGAQNIEIKDLSNSITKTIKCPVQTSEIFYGGTASLLLAT
PSSVVLFDIQQQKIVAEINTPPVKYIVWSTDGNMVALLSKHTITIANKSLSQSALIHETI
RIKSAAWDDSGVLIYTTLNHIKYALPQGDNGIIKTLEQPVYLTRVKGSVVHCLDRSAKPQ
AINIDPAEYRFKLALTRKNYDEVLHIIRNSNLVGQSIIGYLQKKGYPEIALHFVQDEQTR
FDLAIECGNLAVALEMARAVDRHDVWERLGAAALQQGNHQIVETAYQKTRNFDKLSFLYL
ITGNTQKLNMMQVIAGKRGDNMSRFQNSLYLGDVRSRVAVLRETGQYPLAYYTAKTNGLD
DLALEILDEAGFTEDDLPPPPQNSGHSSLAPPPIILSQSDSNWPLKDLGESFFDRALANG
GVDALLGGEESGEQLDAWAADVPVEEDEGEEEAADEDEGWDLDANVEVPDVEEEEFDGED
VLAEADLSQGVEPGASEDEIWQNNSALAIDHAAAGAFESAMLLLNKQVGVVNFEPLKPLF
LQAYQHSHVYVPANASLPPLRLNVRRNPETAELRDALPAVPLNYNELKATEVADANKYFA
RGKFVEALAAFKSVLSKLLLLVVESEEDAEEIKELVTSCREYVIGLTMEVERRRIAVQDP
ENVVRNLELAAYFTHCELATQHIQLALRSAMKVFSDAGNTATAAVFARRLIETQPGQAVL
TQARAVISRGQRNPRDAHEIAYDQNTPFNICAATHTPIYEGSPYEESAYSGAKYLPEYKG
TVCVVDGLSQVGLAGSGLRNTV
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgctcacaaagtttgaaagcaaatccccaagagttaagggcatcgccttccac
ccaaagcagcccttgcttgcggcgtccttgcataacggaacaatccagttatggaactac
caaatgggtactttagtggaccgatatgatgagcatgatggccccgttcgaggtatctgt
ttccaccccacccaacccatcttctgttccggaggtgatgactacaagatcaaggtgtgg
aactacaaacaaagaaaatgcctctttactctgacaggccatctcgactatgtccgaacc
gttttcttccatcgcgaatacccttggatcatctctgcctccgacgaccagactatcaga
atttggaactggcaatctaggacttgtattgctatccttaccggtcacaaccactacatt
atgtgcgcacaatttcacccgtgggacgatctcgtcatctccgcctctatggaccttacc
gttcgtgtgtgggacatctccggtcttcgcaagaaaaaccaagcttctcaagctcccatg
tctgccgaagaacaaatcgctcgtgccagtcagggtcaagctgacttgtttggtaacacc
gatgcagtagtcaagtatgtcctggagggtcacgaccgaggtgtcaactgggcttctttc
catcctacccttcctctcatcgtctcctgtggtgacgaccgccaagtcaagctttggcgt
atgtccgaaaccaaagcctgggaagtggacagctgcagaggtcatttcaacaatgtctct
atgactatgttccaccccaagcacgagttaattctgagtgcgagtgaggacaagactatc
agggcttgggatatgaccaagagaacagccgtccagacctttaggcgagaacatgatagg
ttttgggtgttgactgcccaccctgagctcaacttgtttgctgctggccacgacaatggt
ctgatagtttttaagcttgaacgagagcgtcctcccttctccttgtctggtaatcaactc
ttctacatcaaagacaaagtcgttcgcatggccgacatttccagcggtaacagccaaggc
atctgctctgtccgtaagtttggctcccagtacattcctcctcgaactctcagctacaac
ccggctgagcgagctgttatcgtgacatctccttctgataatggcatctatgaactcatc
accctgccgaagtctacggcgcctactgctcaggatggcagggatgtgccttcagacggt
aagaagggtacagggttctgtgcgctcttcgtggcaaggaacaggttcgcggtcctcgac
aagggtgcccagaacattgaaatcaaagatctttccaactctatcaccaagactatcaag
tgccctgtccaaacctccgagatattttacggaggtacggcctcccttttgctcgctact
ccttcttctgtggtccttttcgacattcagcagcaaaagattgttgccgaaatcaatacc
cctcctgttaagtacattgtatggagcaccgatggtaacatggtcgccctcttgagcaag
cacacaatcacaattgccaacaagtctctttctcaaagcgctcttatccacgagacgatt
cggatcaagtctgccgcatgggacgacagcggcgtgctcatctacaccactttaaaccac
atcaagtacgctcttcctcaaggtgataacggtatcatcaagactctcgaacagcctgtg
tatctcactcgagtgaagggttctgtcgttcattgtcttgatcgttcggccaagccgcag
gctattaacatcgatcctgccgaataccgattcaagcttgctcttacccgcaagaactat
gacgaagtcttgcatatcattcgaaacagcaaccttgttggtcagagtatcattggttat
cttcagaagaagggatatcccgagatcgccctccactttgtgcaagatgagcagacgagg
ttcgaccttgctattgaatgtggtaacttggcggttgcgttggagatggctagggctgtt
gacaggcatgatgtctgggagaggttgggtgccgcagcgttgcagcagggcaaccatcaa
attgtcgagaccgcatatcagaagactaggaactttgacaagctctccttcctctacttg
atcactggcaacacccagaagcttaatatgatgcaagtcatcgctggcaaacgaggcgac
aacatgtctaggttccaaaactcattgtatctcggtgacgtccgatcccgtgtcgcggtg
cttcgcgaaactggccagtatcccctcgcttactacactgccaaaaccaacggtcttgac
gaccttgccttggagattcttgatgaagccggtttcaccgaggatgatctgcctcctcct
cctcagaactctggtcactcttccctcgcgccccctcccatcatcctctctcaatctgac
tccaactggcctctcaaggaccttggtgagagcttttttgaccgggcactcgctaacggt
ggtgtcgacgctttgctcggcggtgaagagagtggagaacaactggatgcttgggcggcg
gatgttcctgttgaggaagacgaaggagaggaggaagctgctgatgaggatgaaggatgg
gatcttgatgctaacgtcgaagtgcctgatgtcgaagaggaagagtttgacggtgaagac
gttttggccgaggcggatttgagtcagggtgtcgagcctggtgcgagcgaggatgagatt
tggcaaaataactctgcattggctattgatcatgctgctgccggtgctttcgaatccgcc
atgcttttgctcaataagcaagtcggtgttgttaactttgaaccccttaagcctttattc
ctccaagcctatcaacactctcatgtttatgtccccgccaatgcgtctctccctcctctt
cgactcaacgttcgccgaaatcctgaaaccgctgaacttcgcgacgccctgcctgccgtt
cctctcaactacaacgaattgaaggcgaccgaggtggccgatgccaacaagtactttgct
aggggtaaatttgttgaggcgcttgcagcgttcaagagtgtattgtcaaaacttttgctg
ttagttgttgaatccgaggaagatgctgaggagatcaaggagcttgtcacctcttgtcga
gaatacgtcattggcctcactatggaagttgaacgacgacgtattgccgtccaagatccc
gaaaacgtcgttcgaaaccttgagcttgccgcttactttactcattgcgaacttgctacc
caacatatccagctagcattgcgaagcgcgatgaaggtgttctctgatgcgggtaatact
gccactgctgccgtgtttgctaggaggttgatcgagacacagcctggacaggctgtcctt
actcaagctcgtgctgttatctcacgaggccagcgtaacccccgagacgctcacgaaatc
gcctacgaccaaaacacaccattcaatatttgcgctgccacccacactcccatttacgag
ggctcaccatatgaggaaagcgcatactctggcgccaagtacttgccagagtacaagggg
acagtctgcgtggttgatgggttgagccaagtaggtttggccggaagcgggttgagaaac
acggtttaa
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integrated database retrieval system
