Cryptococcus neoformans var. grubii H99: CNAG_03637
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Entry
CNAG_03637 CDS
T08175
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit 2
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CNAG_03637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cng03400
]
CNAG_03637
DNA repair and recombination proteins [BR:
cng03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
CNAG_03637
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
DUF722
NUP120_helical_2
Motif
Other DBs
NCBI-GeneID:
23887113
NCBI-ProteinID:
XP_012047158
UniProt:
J9VN62
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Position
2:complement(402338..405710)
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AA seq
841 aa
AA seq
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MSDRAGFTLSIFAIDVSPPMGELKADPSGSGKVSKLSLAKEYVARQIQSKILSGRKTEII
GLISFGGRTNNQAYNYALEGGMENDLYRAVSSDVACQTAKAKALEVLMNLEVGEHAGNPV
SALMVGLDMIQSWKVTKQWSVDLTLITDGETAFEQNEYEEAIGRLDQLQVILRVIGIDFQ
PISQAVDKSKSRNKRLSEKFWRVFTSTLQGRLEQTSNPRLYPALKVFDDSLKAARSPQVA
AVNSTLSAIDLRIGSLNVGRDEAIVIPVRYSKATAKASAPTFSKAWKPAMDLQMPMRSAA
DGISLSNPLISGLLSQSQSQRKNPPSTEEMAGMISAEVKQHHSYVIKKPEINASGNRIST
QASGVEPSEQIDENENEEEDDEEYVDKEDVVKAWKFGSTWVPVPEKTFTTMDTRKGIEVL
GFFPVENIRRYHLIGEARYVWPDLLSPKAQIQFSALIEAMHDRKMCAVTRWVLKDGGEPT
LGACVPVIENKGADEEGKPSILPYMYWLKLPFAEDERTFRFPSLTTIKTNTGKILTEHPL
LPTKEQSLLMDELVLGMDLDEYAREEKRKTQENEGQDVDGQMDEQGQDVTWFKPWEAVNP
VIHRIKEAVFHASLTPDLDKDPLGPPHPELTKYFETPSELAEKVKDVTERLREVLDIKKV
PEKRKRRKTQKEELGEDEGFINEDELFAEPTDTKFITKTEPHTQTPSQPTTSAPIPDQSK
PKPGRLISNSSPIDDFNRVIQVGDVFRKAIQDMNQVVKENVESSFSRQNFAAAIDCLKLM
RSTALGYEEVETYNDCIDSLEQTVKAKGFKHPDFWDYFKSAGKSVSKISEEEAEAAMEDF
E
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagagcgggcttcaccctctcaatttttgccatcgatgtctcgcctcctatg
ggcgagctcaaagccgatccttcggggtcaggcaaggtgtccaagttgagcctcgccaaa
gagtatgtagcaaggcaaatacagtcaaaaatattaagtggaaggaagacggagatcatc
ggacttatcagcttcgggggtcgcaccaacaaccaagcatataactatgctcttgaagga
ggtatggaaaatgatttatatagagcagtgtcctcagatgtggcttgtcaaaccgccaag
gccaaagctttggaggtgttgatgaaccttgaagtaggagaacatgctggtaatcctgta
tctgccctcatggtgggcttagatatgatacaatcctggaaggtcacaaagcaatggtct
gttgacttgacactgatcacagacggagaaactgcgtttgaacagaacgagtatgaagaa
gctattggcaggctagatcaactgcaagtcatcctccgggtgattggtattgattttcaa
cccatttcacaagcagtagataaaagtaaatctcgaaacaaacggctctcagagaaattc
tggcgtgtcttcacctctacgctacaaggacgtttggagcaaacatccaacccgcgactc
taccctgccttgaaagtttttgacgactccctgaaggcagctcgtagcccacaggttgcc
gctgtcaatagcacgcttagtgctatagacctacgcatcggctcattgaatgttggccgg
gacgaggccatcgttatccccgttagatacagcaaggctaccgctaaagcttcagcacct
acattttcaaaagcatggaagccagccatggatttgcaaatgcccatgcgttctgccgcc
gacggcatctcactgtcaaaccccttaatctctgggctactaagccagtcgcagtcgcag
cgcaaaaatccacccagtaccgaagaaatggcggggatgatctcggctgaagtcaaacag
catcattcatatgtgatcaaaaagcctgagattaatgcctcaggcaatcgaattagcact
caagcaagtggagtggaaccttctgagcagatagatgaaaatgaaaatgaggaagaagat
gacgaggaatacgtcgataaagaggatgtggtcaaggcatggaagttcggctctacttgg
gttcctgtgcccgagaaaaccttcacgacgatggacactcgtaagggcattgaagtactt
gggtttttccctgtcgagaacatacgaagataccatctcatcggtgaagcacgatatgtc
tggcctgatctgctctctccaaaagctcaaatccagttctcagcgttgattgaagcaatg
cacgatcggaagatgtgtgcggtaacaagatgggtcttgaaggacgggggtgagccaacg
ttgggtgcctgcgtaccagtcattgaaaacaaaggggccgatgaagaaggaaagcccagc
atattgccgtacatgtactggctgaaactgccttttgccgaagacgaacgcaccttccgt
ttcccatcactgaccaccatcaaaaccaacaccggcaagattttgacagaacatcccctt
ttgcctactaaggagcaaagtctgctgatggatgaattggttctgggtatggatttggat
gaatatgcaagagaggagaagagaaagacccaggagaatgagggacaggatgtggacgga
cagatggatgaacaaggccaagatgttacttggtttaagccatgggaggcggtgaaccct
gttattcatcgaataaaagaggccgttttccatgcgtccctcacccctgatcttgacaaa
gatccgcttggaccgccccatcctgaacttaccaagtactttgaaacgccatcagagctt
gctgaaaaggtaaaagacgtgactgagcgattgagagaggttctagatatcaagaaggtt
ccggagaagaggaagaggcggaagacgcagaaggaagaactaggcgaagacgaaggattt
atcaatgaggatgagctcttcgctgaaccgaccgacacaaaattcatcacgaagaccgaa
cctcatacccaaacaccatcgcagcccacaacttcagcccctattccagaccaaagcaag
ccaaagccgggaagacttatcagtaacagtagtccaattgacgattttaaccgcgtgatt
caggttggagatgttttccgcaaggccattcaggatatgaatcaagtggtaaaggaaaat
gtggagagcagtttctcaaggcaaaactttgctgcagcaatcgattgcttgaaattgatg
aggtctaccgcccttggatacgaggaagtggaaacttataatgactgcattgattctctt
gagcaaactgttaaggctaaaggtttcaaacatcctgatttctgggattattttaagtca
gccggtaaatctgttagtaagatttcggaagaagaggccgaggcggccatggaggatttt
gaatga
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