Cryptococcus neoformans var. grubii H99: CNAG_03665
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Entry
CNAG_03665 CDS
T08175
Name
(RefSeq) ATP-dependent RNA helicase DDX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
cng
Cryptococcus neoformans var. grubii H99
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cng03041
]
CNAG_03665
Enzymes [BR:
cng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CNAG_03665
Spliceosome [BR:
cng03041
]
Complex C
Other components
Complex C specific factors
CNAG_03665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
AAA_22
DEAD
HA2_N
AAA_19
Cas3-like_C_2
SRP54
T2SSE
AAA_30
ABC_tran
nSTAND3
Zeta_toxin
Helicase_RecD
AAA_29
DUF2406
AAA_16
Fe_hydrogense_Fe-S_bd
Motif
Other DBs
NCBI-GeneID:
23887141
NCBI-ProteinID:
XP_012047170
UniProt:
J9VN89
LinkDB
All DBs
Position
2:479258..482870
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AA seq
699 aa
AA seq
DB search
MPPLQFWKPGTAAPGSSLDRESEKDGSLLPVNTSQNAHLSLDAQRQRLPIYKHREKLLWC
VEKYSVVIVVGQTGSGKSTQLPQYLHEAGWTGQSHVVACTQPRRVAATSVATRVAEEVGS
VLGDEVGYTIRFEDLSHPTRTRIKYMTDGMLFRETMMDPLLSKYSVIMIDEAHERGAYTD
LLLGLLKKIMRKRPELRVIISSATIDAEDFLEYFNTNADGTDRSKDDAIIVSLEGRMFPV
EVCYLKEPCADYTQAAVQTVFDIHLREPLGDILVFLTGREEIDQVIQEVADRLLSLPKAA
PKLLALPLYATLPPEEQSLIFDPSPRDTRKVIFSTNIAEASVTIDGIKYVVDSGFVKIKT
YNPRTCMDVLTTTPCSLASANQRAGRAGRTSAGKCFRLYPASILPSTNPSSPMPLATPPE
LVRSDISLYLLQLKALGIDNLAKFDFMSPPPSEMMIRALEFLFCLKAIDDEGRLTSLMGE
RMAEVPLDPMMAAILLNSHEFRCGQEILTIAAMTSVQNVFITAEGGTKATMAELERRKFT
AEEGDHLTLLNAYNAFARYGQNNKQWCGNHRLNYKALSRAMSIRKQLKKYMERFKIPIVS
CEGDAVRLRKCLVSGYFKNAAKMMPDGTYRSARENAPLHVHPSSVMFTRQPSTGWVIYHE
VVETTKSFMRDLTIIDEDWLVELAPHFYRFKGGGLKQHF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctctccagttctggaagcctggaacagctgctccaggtagctcccttgataga
gaatccgagaaagacggttcattactccccgttaacacatcacaaaatgcccatctcagt
ttggatgcccagcgacaaaggttacccatctacaaacatcgagagaagctgctatggtgt
gtagagaagtactctgtggtgatcgttgttggccaaactggtagtggaaaatctacacaa
ttgccgcaatatcttcatgaggcaggatggacaggacaaagtcatgttgtagcttgtact
cagcctcgtcgggtggctgctactagcgttgccacgcgagtagccgaagaagtgggcagc
gtccttggtgatgaggttggatacacaatcaggttcgaagatttatcacatccaacacgc
accaggataaagtacatgacggatggaatgcttttccgagaaaccatgatggatccatta
ctgagcaagtacagcgtcattatgattgatgaggcgcatgaaaggggagcatataccgac
ctcttactaggtttgctcaagaagatcatgagaaaaaggcccgagctgcgagtcatcatc
tcctcggccactatcgatgcagaggactttttagagtatttcaatacaaacgcagacggt
acagatcggtcaaaagacgatgccatcatcgtcagcttggaaggtcggatgttcccagta
gaagtctgttaccttaaggaaccatgtgcagattatacccaggcggcggtccagacagtg
tttgacatacatttgagagaaccgcttggagatatcttggtctttcttactgggcgagaa
gagattgatcaagtgatacaagaagttgcggatagattattatctctacccaaagccgcg
cctaaactactcgctttgccgctttatgccactcttccacctgaggaacaatcacttatt
tttgatccctctccgcgcgatacccgaaaagttatcttctcaaccaacattgcagaggcg
agtgttaccattgatggtataaaatatgtcgtcgactctggctttgtcaaaatcaaaaca
tacaatcctagaacatgtatggacgtcctcacaaccaccccttgttcacttgcctctgca
aaccagcgtgccggtcgtgccggtcgtacatctgccggcaaatgctttcgcctttatccc
gcttccatcttgcccagcaccaacccatcatcacccatgccattggctacccctcctgag
ctcgtgcggtccgatatatcgctttatcttctccagcttaaagctttgggtatcgataat
ctcgccaaattcgattttatgagccctccgccgagtgagatgatgatcagggcgttggaa
ttccttttctgtttgaaagcgatagatgatgaaggaagattgacaagtctaatgggtgag
aggatggcagaggtccctttggatcctatgatggctgccattctgttaaactctcacgag
ttccgatgtggacaagagattctgactattgctgccatgacttcagtgcagaatgtgttt
atcacagccgaaggaggaacgaaggctacaatggctgaactggagaggcggaaattcaca
gcggaggaaggggatcatttgacgctattaaatgcgtacaacgctttcgctcgatacggc
caaaacaacaagcaatggtgtggtaaccatcgtctcaattacaaggctctttcgcgtgcc
atgtcaattcgaaaacagctcaagaagtatatggagaggttcaagattccgatcgtaagt
tgcgaaggtgatgcagtcaggttgaggaaatgcttggtttctggttacttcaagaatgcg
gccaagatgatgccagacgggacatacagatcagctcgtgaaaacgcgcctttgcatgtc
catccttcatcagtcatgttcactcgtcaaccatccacaggttgggtaatataccatgaa
gtggtggagacaacaaaaagttttatgagggatttgacgatcatcgatgaggactggcta
gtggagttggcgcctcacttctacaggttcaagggaggcggattgaagcagcatttctga
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