Cryptococcus neoformans var. grubii H99: CNAG_03699
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Entry
CNAG_03699 CDS
T08175
Name
(RefSeq) pre-mRNA-processing ATP-dependent RNA helicase PRP5
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CNAG_03699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cng03041
]
CNAG_03699
Enzymes [BR:
cng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CNAG_03699
Spliceosome [BR:
cng03041
]
Complex A
U2 snRNP components
U2 related factors
CNAG_03699
Complex B
CNAG_03699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
TsaD
Motif
Other DBs
NCBI-GeneID:
23887173
NCBI-ProteinID:
XP_012047394
UniProt:
J9VKR5
LinkDB
All DBs
Position
2:563133..567296
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AA seq
1071 aa
AA seq
DB search
MPRSPYRSSNRSYRSPSPSRNDRSRPSSSSRRLDNRKASRYDDDYSRDRERERERERDRD
RARDYRDRDRDYDRVRDRDRYREDDRDRRRRDDREDRRREERDRDSDRKRDSERRSPMPT
IRLEPNVSLASPAPETEEEKKRKAKERLETWKRQRALKEGKSAAATPEPKSPAPPPVTSG
LPPKPTAFTLSRIGLPLKPTNPTPLKRSMTALDDEDTSDRKLQKLDLPDFDPEVQSGDAA
QVGSIGADLAVADGDEDDDTVVKQEEEKMDIDEKVEEDEEEDPLDAFMRDNVQQVVEVNK
ADAKRMGLRVAEDGSDDEDQGKIVEKDKLAEAEALLQQAAAKSRKKDLPPPDHSKIDYEP
FRKAFYVPPVEVMEMDEEEAELVRLEMDGIKIRGQDAPKPVRNWGAFGLPQGCLDVIKHQ
GWETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRDQRPVSGSEGPIAVV
MSPTRELATQIYKECQPFLKVLNIRASCCVGGSSISEDIAAMKKGAEVVICTPGRMIDLL
TANNGRVTNVRRTTYIVMDEADRMFDMGFEPQVMKIINNVRPSAQKVLFSATFPKTMESL
ARRILVKPLEITVGGRSVVAPEIDQRVEVRDGDTKFTRLLEILGEMGEEHKDEDDFRTLI
FVDRQESADDLFRELLQRGYVCASLHGGKEQVDRDEAIKNFKNGDVPIIVATSVAARGLD
VKELKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCITFITPEQERFSVDIVRALEASKAF
IPDDLKKMSDSFLGKIKSGKARAAGSGYSGKGLERIERRREEKDRAEKTTYGDTSEALSL
SSREGAVIPYKAKTNEFKPPETSHKGEADYTFTEIKVDIVNGPAPDRVPSQPVFNPKNAV
ASLPAQTLAALEKAKKEGRGVDAANLANVVAKLTQSIELTKAEKLGLAAATSAPRLAPGA
RTKDPDATDWHAIFPINDYPQKARWKATNKEQMTLLQEVSGASITMRGRFYPPGEEPALG
GEPKLSLLIESNDEMRVRAAVEEIRRVLVEGSVQALNAVDRAGATGGRYAV
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgcctagatcaccatatagatcatcaaataggagctatcgcagcccctcgccgtcccgg
aacgaccgctctcgcccgagctcctcttctagacgtcttgataaccgaaaagcctcgagg
tacgacgatgactattcgagggaccgagagagagagagagaaagggaaagggatagagat
agggctagagactacagggatagagatagggattatgatagggtgagagatagggatagg
tatcgtgaggatgaccgagacagacggaggagagacgatagagaagacaggcggcgagaa
gagagggatcgagattctgaccgcaagagagattccgagaggagatcccctatgccgacc
atccgtctggagcctaatgtatcattagcttcaccagctccggaaaccgaagaggagaaa
aaaagaaaggcaaaagagagactggaaacttggaagcgccagcgtgccttgaaggagggt
aagtctgcagctgcaacacctgagccgaaaagccctgcacctccccccgttacttctggt
ctgccgcccaaacccaccgcctttaccctctctcgtattggtctcccactcaaacccaca
aatccaacgccactcaaacgcagcatgacagctcttgacgacgaagatacatctgaccgc
aagctacaaaaactcgatctacctgactttgatcctgaagtgcagtcaggagatgcggct
caggtgggctccattggtgcagatttggcggtggcagatggtgatgaagatgatgatacg
gtggtcaaacaggaggaagaaaagatggatatagatgagaaagtagaagaagatgaggaa
gaggatccgttggatgcgttcatgagagacaacgtgcagcaggtcgtggaggtgaacaag
gcggacgccaagcgaatggggttacgggttgctgaagatggcagcgacgacgaggatcag
ggaaaaatcgtggagaaggataagcttgccgaagcggaagcattgttgcagcaagctgcg
gctaaatcacgcaagaaggatcttcctcctcctgaccattccaagatcgactatgaacct
ttccgcaaggctttctacgtaccgcctgttgaagtaatggagatggatgaggaagaagct
gaattagttcgtttggaaatggacggcatcaaaattcgaggacaggatgctccaaagcca
gttaggaactggggcgcctttggcctgcctcaggggtgtctcgatgtaatcaagcaccaa
ggctgggaaacacccacgtccattcaagcccaggctatcccagctataatgtctggccga
gacgtcatcggtattgctaaaaccggttccggtaagactgttgctttcctcttgccaatg
ctccgtcacgttcgcgaccaaaggcctgtgtccggtagtgaagggccgattgcggttgtc
atgtcacctaccagggagttggccactcagatttacaaagaatgtcagccctttctcaag
gtgctcaacattagggcttcctgctgcgtcggcggttcgtcaattagtgaggatatcgct
gccatgaagaagggtgccgaagtggttatttgcactcctggccgaatgatcgaccttctc
accgccaataacggccgcgtcacaaacgtccgacgcaccacttacattgttatggatgag
gccgaccgaatgtttgatatgggctttgaacctcaagtcatgaaaattattaataatgtt
agaccgagcgctcagaaggttctattctcagcaacattccccaaaacaatggaatcactt
gcgaggagaattttggtgaagcccttggagatcacagtcggaggcagaagtgttgtcgca
cccgaaattgaccagcgtgtcgaagtgcgtgatggtgatacgaagttcacacgtttgctt
gaaatccttggtgagatgggcgaggagcacaaggatgaagatgatttccgcactcttatc
tttgtagaccgtcaagaaagtgcggatgatctatttagagagctgctacagagaggttat
gtctgtgcttcattgcacggcggtaaagagcaggtcgatcgagatgaagcgatcaagaat
ttcaagaatggtgatgtacctatcattgtggcgacttcagtagcggcaagaggtttagat
gtaaaagagttgaagcttgtcattaattatgacgcacctaaccatatggaagactatgtt
caccgtgctggccgaacaggtcgtgcaggaaacaaaggcacttgtataacgtttatcaca
ccggagcaggaaaggttctccgtcgacatcgtacgagctttagaagcgagtaaggcattc
atccccgatgacctgaaaaagatgtcggattcattccttggcaagatcaaatctggcaaa
gcccgagcagctggtagtggatacagtggtaaaggcctcgagcgaatcgaacgccgtcga
gaggagaaagaccgagccgaaaagacaacctacggcgatacgtccgaagccctgtcactc
tcctcgcgtgagggtgctgtcatcccttacaaagccaagacgaacgagttcaagcctcca
gagacctctcacaagggtgaagcagactatacattcacagaaatcaaggttgatatcgtc
aatggtcctgcgcccgaccgcgttccctctcaacctgtatttaacccaaagaacgccgtg
gcctctttgccagcgcaaacattggcggcactagagaaggcaaagaaggagggccgaggc
gtagatgcggcgaatctggccaatgtggtggccaaactaacccaatctatcgaactcacc
aaagcggagaaacttggcttggcggcggccacctctgcgcctcgtcttgctcctggcgcg
agaacaaaagatcccgacgccaccgactggcacgctattttccccatcaatgattaccct
caaaaggctcgttggaaggctaccaataaagagcaaatgactttgctacaagaagtatca
ggagcaagtatcacaatgcgaggcagattctacccgcctggggaggagcctgcgttgggt
ggtgaacccaagttgagtctgttgatagagagcaacgacgaaatgcgagtgagggctgct
gtagaggaaattcgaagggtgctggtcgaaggatcagtacaagcgcttaatgcggtcgat
agggcgggcgcgactggcgggaggtacgctgtgtag
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integrated database retrieval system
