Cryptococcus neoformans var. grubii H99: CNAG_03761
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Entry
CNAG_03761 CDS
T08175
Name
(RefSeq) mRNA 3'-end-processing protein RNA14
KO
K14408
cleavage stimulation factor subunit 3
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CNAG_03761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_03761
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
CNAG_03761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_2
TPR_8
Motif
Other DBs
NCBI-GeneID:
23887229
NCBI-ProteinID:
XP_012047437
UniProt:
J9VFW9
LinkDB
All DBs
Position
2:complement(730611..734436)
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AA seq
1066 aa
AA seq
DB search
MSHEHPADIVNQLQSIDSIQQDLADTAAAVVDAASQSHPPQHAAQDQKSQSTLLDNAEAM
ESILESAIPPAPGSSSTTAASDAIGDNNLTASGPPPISDTVVAPSAADDEIGDVIVVGVE
TPTTANAVEAVVNPVNNGDIPIESTEQSSEQPPEQSVEQSAEQSGEQPPEQPAVETPQAP
QPNSAAPAAAAIESIPTYLEETQLEQIVQAPVPTAHTEPPTPVVDSKMEEKPLVEHVAWA
PPQGIHSDVFLPEGLTEYSPSVSQNGELIRSWRADPSNPTLLLSLFNWAVQKTEVEDARA
WYRVLAVDNPTAAQPLLALINLELALSNFAEVEAIFASTLKGSAGITTAADVSIWTAYLH
YIRRQNPLAEGSANAADVRSTITEAYEFALRECGFDRESGDIWDEYIKFVASGPATNQWD
TQAKNDNLRKIYQRAVCIPLNNIEALWKSYDTFESSLNKLTAKKYLAEKSPAYMTARTAL
RELRALSDPIPKPILPPYPTFTEQDRQIVSAWKACLRWEEGNPLVIENHDVLQSRIGYAL
RKCLGEMRHFAELWHYAASYYSKLGKQDEAAEILEAGVNACPKSFLLTFAYAELQEERKA
FPTCHSLYTTLISKLNPEVDELRQNVAREIEIARGPSIPGSEKAAAAAAVGDSIDVDGND
ISDIQRLVEEREQRGELVAQRRGKDIEELMVGISVVWIMYMRFARRAEGIKAARGVFGKA
RKSPHLTWHVFEASALMEFHTNKDAAVAIRIFELGLKQFSEDVDYVIKYLQFLLSINDDN
NARALFERSAVRIMGDKARPLWDAWARYEYTYGDLSAVHKLEARFSEVFPEDAPLKRFAQ
RWSYNGIDQIAIRDLGFNRARMGVAVPPVPAVAPALPPPTASIPAPIAAPVPVQPPQESY
KRSAPDDIPPRRPSSAEFSRSPKRHRAQSPPRRYAERDDRPPPGRYRDSIPPVKAPSSIP
PPHLGAGPAYATPPSGAYGGDKDRSGLEKPLAWFMAQLPNARSFDGPVFRPDDIMKLFGG
LSLPGAGMPPAPPPISRGPAPTPMQSRGYYEPERDRRYGGHRSGRY
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacgaacaccccgcagatatcgtcaaccagctgcaatcaatagattccatccag
caggacctcgcagatacagccgctgccgtcgtcgatgctgcctcccaaagccatcctccc
caacatgctgcacaagatcaaaaatcccagtcaaccctgttggacaatgcagaggcaatg
gagtctattcttgaaagtgccataccgccagctccaggttcatcatccactactgccgca
tctgatgccattggagataacaatcttactgcgtctggtcctcctcctatttccgatacc
gtcgttgcgccatctgctgcagatgacgaaattggagacgtgattgtcgttggagtcgag
acgccgacaactgccaatgctgtagaggcagttgtcaacccagtaaataatggtgatatc
ccgatagagtccacagaacagtcctcagaacagcccccagaacagtccgtagaacaatcc
gcagaacagtccggagaacagcccccagaacaacctgctgtcgaaacgcctcaagcgccc
caacccaattctgctgcacctgccgcagctgccattgaaagtatcccgacttatttggag
gaaactcagcttgagcaaatagtgcaagcacctgtcccaactgctcatactgagcctccg
acgcccgtggtcgacagcaaaatggaagaaaagcctctggtagaacacgttgcatgggca
ccacctcaaggaatccactctgatgtctttctcccggaaggtctgacggaatattctcca
agtgtgagccaaaatggcgagctgatcaggtcttggcgtgctgatcctagcaacccgacc
ctgttactttctcttttcaactgggccgtccaaaaaactgaggtggaggacgctagggct
tggtatcgggttctggcggttgataatccgactgcggcccagccgctgctcgctttgatc
aatttggagttagctctttccaacttcgccgaagtagaggctatctttgccagtacactc
aaggggagcgctgggataacaactgcggccgacgttagtatctggaccgcatatctccat
tacattcggcgacaaaaccctcttgctgagggttcagccaatgccgctgatgttagatca
acgatcaccgaggcttatgagttcgcgcttcgagagtgtggctttgaccgagagagcgga
gatatctgggacgagtacatcaaatttgttgcgagtggccctgctaccaatcaatgggac
acgcaagccaaaaatgataaccttcgaaagatctatcaacgagctgtttgcattcccctc
aacaacattgaggctctatggaagtcctacgacacttttgaatcttccctcaataagctt
accgccaaaaaatatctcgctgagaagtctcctgcttatatgacagctcgtactgccctt
cgtgaacttcgtgcgctttcggaccccatccctaaacctatcctgcccccatatcccact
ttcacagaacaggacaggcagatcgttagtgcttggaaagcatgtctgagatgggaagaa
gggaatccattggttatcgagaatcacgacgtgttgcaatccaggattgggtatgcattg
agaaagtgtttgggtgaaatgagacattttgcagagctctggcattacgccgctagctat
tactccaagctgggtaaacaggacgaggctgcagagattctcgaagccggtgtgaatgct
tgtcctaaaagcttccttctcacgtttgcttacgctgaacttcaagaagagcgcaaagct
tttccgacttgtcattcactctatactactctcatctctaagttgaatcccgaagtcgat
gagctccgtcagaacgtcgctcgtgaaattgagattgctcgcggtccctctatccccggc
tctgaaaaggctgcagcagcagctgccgttggcgacagcattgacgttgacggtaatgac
atcagtgatatccagaggctcgtggaggaacgggaacagagaggggagcttgtggcgcaa
aggagagggaaggatatcgaagaactgatggttggcataagtgtcgtgtggataatgtac
atgaggtttgctcgcagggcagagggtatcaaagccgctagaggagtatttggaaaggct
cgaaagtcgcctcatcttacgtggcacgtatttgaagcgtcagctttaatggaatttcac
accaacaaggacgccgccgttgctattagaatttttgaattgggtttgaagcagttctcc
gaggatgttgattatgtgatcaaataccttcaattccttttgtcgattaatgacgataac
aacgcccgagctctctttgaacgttcggctgtcaggattatgggcgacaaggctcgacct
ttgtgggatgcttgggctcgttatgagtatacctacggtgacctgtctgcggtacacaag
cttgaagctcgcttttctgaagtcttccccgaggatgctcctctcaagcgtttcgcgcaa
aggtggtcatacaacggaatcgatcaaattgctattcgagatcttggcttcaaccgtgct
cgaatgggcgttgctgtgcctcccgtacctgccgtcgcccctgctctcccgccgcctact
gcttccattcccgcccctattgccgcccctgtcccagtacagcctcctcaagaatcatac
aaacgttctgctcccgacgatatccccccacgacggccttcctctgcagaattctctcgt
tcccccaaacgtcaccgtgcacaatctccccctcgccgttatgctgagcgtgatgaccgt
cctcctccgggccgatatcgcgactcaatcccacctgtcaaggccccatcaagcattcca
ccacctcatctcggtgcaggaccagcgtatgcaacacctcccagtggggcgtatgggggc
gacaaagacaggagcggtctagaaaagcctttggcgtggttcatggcacaacttcccaat
gctcgttcatttgatggccctgttttccgtcctgacgatataatgaagcttttcggcgga
ctttcactgccaggtgcaggtatgccccctgcacctcctcctatcagcagagggcccgcc
ccaacacccatgcaaagtagaggatattatgaacctgaaagggacagaagatatggggga
cacagaagcggaaggtactga
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