Cryptococcus neoformans var. grubii H99: CNAG_04074
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Entry
CNAG_04074 CDS
T08175
Name
(RefSeq) coatomer beta' subunit
KO
K17302
coatomer subunit beta'
Organism
cng
Cryptococcus neoformans var. grubii H99
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cng04131
]
CNAG_04074
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cng04147
]
CNAG_04074
Membrane trafficking [BR:
cng04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
CNAG_04074
Exosome [BR:
cng04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
CNAG_04074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_SCAP
NBCH_WD40
PEP5_VPS11_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_LRRK2
PQQ
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
PQQ_2
DUF7742
Motif
Other DBs
NCBI-GeneID:
23887520
NCBI-ProteinID:
XP_012047661
UniProt:
J9VLV1
LinkDB
All DBs
Position
2:1559551..1563127
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AA seq
829 aa
AA seq
DB search
MPMLLDITRKLLARSDRVKSVDFHPTEPHVICGLYNGQVKIWDYETGTDVKAFEVTDVPV
RCVRYIARKNWFVSGSDDFQLRVYNISTGEKITQFEAHPDYIRCLTVHPTLSLVLTGSDD
MTIKCWDWDKGWRCVQIFEGHTHYIMALAINPKDPQTFASACLDHTVKVWSLGNSVPNFS
LEAHEKGVNYVDYYHGGDKPYIVTTGDDRLVKIWDYHSKSCVQTLESHTANVSFAIFHPS
LPIIVSGSEDGTVKIWHSSTYRLENTLSYGLERAWCVAYKKSGNEVAVGFDEGAVVVKLG
RDEPAVSMDTSGKIVYARNTEILTANLSTLSDSEPLEDGQRVPLPLRDLGTTEVYPQSLQ
HSPNGRFVTVCGDGEYIIYTSLAWRNKAFGNGSSFAWAGDSNTYAVQEGKAKIRVFRSFK
ERPNLLKSAGNWAVEGIHGGTLLAARGNGFVMFWDWETGSVVRRIEVDATSVSWSATGNL
VVITAEDSFYVLSFNREAYDAKLDSGELIGDEGVEEAFEVIAEISETVKTSKWVGDCFVY
TNSTNRLNYLIGDQSHTVNHFDQGIYLLGYLPSHNRIYVADKDMNIYTYALSVSVVEYQT
AILRGDLDAAAEILPSIPQDQRNRIARFLETQDLKELALSVSTDPDQRFDLAVSLDDLET
ALLLVRAADESAATPSGDAAGVGAGVSVNQAKWKVVGDKALAAWQMDLAKEAFQNANDLS
SLLLLYTSLSDRTGLSSLAQVASQKGLNNLAFAAYLQLGDVAACIDLLVKTDRLAEAALF
TRSYAPLTKETEKEWGATVKLWKEQLTKDGRGKVAEKVAEPGEDRELFN
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgcctatgttactcgacattaccaggaaactactggcccgatcagacagggtcaagtca
gtagacttccatcctacagaaccccatgtcatctgcggtttatataatggtcaagtcaag
atatgggactatgagacaggcacagatgtcaaggcttttgaagtgacagacgtccccgtc
cgatgtgtccgctatatcgcccgaaagaactggttcgtttctggctctgacgatttccaa
ctccgagtatacaacatctctaccggcgagaagattacacaattcgaggcgcacccagat
tatatccgatgtttgactgttcacccgacgttgagcttggtcttgactggtagtgacgat
atgactatcaagtgctgggactgggacaagggatggcgatgtgttcagatctttgaagga
cacactcactacattatggctctcgccatcaacccaaaggaccctcagacatttgcgtcc
gcctgcttggaccataccgttaaggtctggtctcttggaaactcggtccccaacttttct
ctcgaggcgcatgaaaaaggtgtcaactatgttgattactaccatggcggtgacaagccc
tatatcgtgacaactggtgatgaccgacttgtcaagatatgggattaccactctaaatcc
tgcgtgcaaaccctcgaatcacacactgccaacgtctcgtttgccatcttccacccttca
ttgcctatcatcgtctctggttccgaagacgggaccgtcaagatctggcactcttctacg
tatcgactggagaacactctgagctatggacttgagagggcttggtgtgtggcgtacaag
aagagcgggaatgaagttgccgttggtttcgatgaaggtgctgttgtcgtcaagctcggt
cgagatgaacccgccgtatcgatggacacctctggcaaaatcgtctacgcacgcaacact
gaaatcctcactgccaacctctccaccctctccgacagcgaacccctcgaagacggccaa
cgtgtccccctcccactccgtgacctcggcaccaccgaagtctaccctcaatctctccaa
cacagccccaacggccgattcgtaactgtctgtggcgatggcgagtacatcatttacact
tcccttgcgtggaggaacaaggcgtttgggaatggatcgagctttgcttgggcgggcgac
tcgaatacctatgctgtgcaggaaggcaaggctaagatccgtgttttccgatcgttcaag
gaacgacccaacctcttaaaatcggcgggcaattgggctgtggaaggtatccatggtggc
acgttgctcgcagcccgtggcaacggattcgtcatgttttgggattgggagactggatcg
gtcgtgagaaggatagaggtggatgctactagtgtgagctggagcgcgacaggtaatctt
gtcgttatcactgcagaggactcgttctacgtgctctcgttcaatagggaggcgtatgat
gccaagttggatagtggagagttgattggagatgaaggtgtggaagaggcgtttgaagta
attgccgagattagcgaaacggtcaagacatctaaatgggtcggcgactgctttgtctac
acaaactccaccaaccgccttaactacctgatcggcgaccagtcccacacagtcaaccac
tttgatcaaggcatctacctccttggttacctgccttcccacaacaggatctacgtcgcc
gacaaggacatgaacatctatacctacgccctctccgtctccgtcgttgaataccaaacc
gccatcttgcgaggcgaccttgatgcagccgcagagatattgccgtccattccgcaagat
cagcgaaaccggatcgcgcgattcttggagacgcaggacctgaaggaattagcactctca
gtgtcgacggatccggatcagaggtttgatttggctgtatcacttgatgatcttgaaacg
gctcttttactcgtgcgcgctgccgacgagtctgctgccactccttccggtgacgccgcc
ggtgtcggtgcaggtgtcagtgtaaaccaagcgaaatggaaggttgtcggcgacaaggct
ctcgccgcatggcaaatggacctcgcaaaagaagcgttccagaatgccaacgacctctca
tccctcttacttctttacacctccctctccgaccgaaccggtctctcctcccttgcccaa
gtcgcctcccaaaagggtcttaacaatctcgcttttgcagcatacctccagctcggcgat
gttgccgcttgcatcgacctcttggtcaagactgataggctggcagaagcggcattgttt
acgagaagttatgcgcctttgacaaaggaaacggagaaggaatggggagcgacggtcaag
ctttggaaggagcagttgacaaaggatggaagagggaaagtggcggaaaaagtggcggag
ccaggggaggatcgagagttgtttaactaa
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