KEGG   Cryptococcus neoformans var. grubii H99: CNAG_04226
Entry
CNAG_04226        CDS       T08175                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
cng  Cryptococcus neoformans var. grubii H99
Pathway
cng03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CNAG_04226
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cng03041]
    CNAG_04226
   04121 Ubiquitin system [BR:cng04121]
    CNAG_04226
Spliceosome [BR:cng03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    CNAG_04226
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    CNAG_04226
Ubiquitin system [BR:cng04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    CNAG_04226
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 23887664
NCBI-ProteinID: XP_012051448
UniProt: J9VRT6
LinkDB
Position
9:340621..342992
AA seq 678 aa
MSMNKESLTDEEAIQLRLQLGLSAPGAAAVDGAEPPVDTDAIAEENYAQRKAEMKREKEE
KELKERIDKARNKSALNAKLKGTTLSAPSTDDSLDAKSWIKRQKKREKQRAREIAAMQAR
DKEEQDRLMYGEEDLAGLKVGHGVEEFEEGEDVILTLKDTGVLEGGEDELQNVNLVEDAA
IKAARERKRKAQQAYTGYDDEEFDENRIGQRADVLGKYDEDFATGKVRTEGFRLGAPVEM
KMKIQDEDEQMGIAPARKVKLHLDYTKEFEVSDYAKEGEAGFKKPKKKKAKRSTRRTEAE
EDTMEVDGESTFTRRVVTDGPDNLVDDEDLQAALSRARRANAKKKPKIKPEDVAAQIAQR
KQEEGEQVKEEDGEEDGRITFDETSEFARNVSLESRAISVKRERISPPPSGITPVTEAGP
SEEPVMVKIERREEGEVDDEDDEMGEEDADLAEIAAREGMSLEEYREKIDRQMREMEEMK
KEAKDEDEAEPTVGQGVAGVLALLRHQGALKARTAEDEERERVQKQKDLWLADYRRRMAQ
RELERIQARGGNKDQAQREWENRMREQQEARDALDIYKNYKPDVNIVYHDEFGRQMTPKE
AWKSLSHKFHGKTSGRMKTEKRLKKIAEERKQLTMNSSDTPLGMTDAFSRRQQMTGEAHM
ILSVGNKQSVQAGSSKRR
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgtccatgaacaaggaatccctcacagatgaggaagctatccagcttcgtcttcaactt
ggcctttcagctcccggcgcagctgcggtagacggcgccgaaccacctgtcgacacagat
gccatcgcggaggagaactatgcgcaaagaaaagcagaaatgaagcgcgagaaggaggag
aaggagctcaaggagcgtatagacaaagcccgtaacaaatcggccctcaatgccaaactc
aaaggtacaactctttccgctccctcgacggacgatagccttgatgccaagtcctggatc
aaaaggcaaaagaaacgtgaaaagcaacgtgcgcgagagattgctgcgatgcaagctcga
gacaaggaggagcaggacaggctgatgtatggagaagaagatctcgcgggccttaaagtt
ggacacggagtagaagaatttgaagaaggagaggatgtgatccttacattgaaggatact
ggggtgttggaaggtggagaggatgagttgcaaaacgtcaaccttgtggaagatgcagcg
atcaaagctgccagggagagaaaacgcaaggcccagcaagcgtacacgggctatgatgat
gaggagtttgacgagaatcgaattggccagcgagcggatgtattgggcaagtatgatgaa
gactttgccaccggaaaggttaggacggagggattcaggcttggagcacctgtagagatg
aagatgaagattcaggatgaggatgagcagatgggcattgccccagctcgaaaagtcaag
ctccatttggactacacaaaagagtttgaagtgtcggactatgccaaggaaggcgaggcc
gggttcaagaagcccaagaaaaagaaggccaagcgatctacccgccgtactgaagcagaa
gaggacacaatggaagttgacggcgaatccacattcacccgaagagtcgtaacggacggc
ccagacaatcttgttgacgacgaagacctacaagctgccctttctcgtgcgagacgtgcc
aacgccaagaagaagcccaagatcaaacctgaagatgttgccgcgcagattgctcagcgg
aaacaagaggaaggagagcaagtcaaggaggaggatggagaggaggatgggagaatcacc
tttgacgaaacgtcagaatttgccagaaacgtgtctttggagtctcgggccatctctgtc
aaacgagagcgtatttctccccccccatccgggataacgcctgtcactgaggccggtcca
tccgaagaacctgtcatggtcaaaattgagcgtcgcgaagaaggagaggttgacgatgag
gatgatgagatgggtgaagaagatgcggatctcgcagaaattgctgctagagaaggaatg
tcacttgaagagtatagggaaaagattgataggcagatgagggaaatggaagagatgaaa
aaggaagcgaaagatgaagatgaggccgaaccgactgttggccaaggtgtggccggtgtc
ttggctcttcttcgacatcaaggtgccctcaaagctcgcacagccgaagacgaagagcgc
gagcgcgtgcaaaagcaaaaggatttgtggcttgcagattaccgtcgacggatggcccag
cgcgagttggagaggattcaggcgagaggcggcaacaaggatcaggcacagagggaatgg
gaaaacagaatgcgagagcagcaagaggcgagagatgctttggatatctacaagaactac
aagcctgatgtgaatattgtgtatcacgatgagttcggaaggcaaatgacacccaaagaa
gcgtggaagagtctttcccacaagttccacggcaagacctcaggtcgaatgaagaccgaa
aaacgtctcaaaaagattgccgaggagcgcaaacaactcaccatgaactcctcggatact
cctctcggtatgactgacgccttctctcgccgacagcaaatgaccggtgaggcgcacatg
attttgagtgttggaaacaagcagtcggtgcaggcaggtagtagcaaaaggcgttag

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