Cryptococcus neoformans var. grubii H99: CNAG_04268
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Entry
CNAG_04268 CDS
T08175
Name
(RefSeq) exodeoxyribonuclease III
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
cng
Cryptococcus neoformans var. grubii H99
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cng03400
]
CNAG_04268
Enzymes [BR:
cng01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CNAG_04268
DNA repair and recombination proteins [BR:
cng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CNAG_04268
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
23887703
NCBI-ProteinID:
XP_012051465
UniProt:
J9VRX1
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Position
9:complement(437289..440005)
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AA seq
719 aa
AA seq
DB search
MRILTWNVNVLRTCLDYHPFSSMQKKNIEGLLDELDAQIFCFQEHKTVRTRLEKSMACPG
PYDGFWTFPRSKTGYSGVCTYVDSRYCVPLKAEEGITGLLLGDRLSTMKPPWTDVERIGS
YPDVNDMEWMDELDGTKFDVKKLDMEGRAVVCDFGLFVLFNLYCPNETNGARRPYKMNYL
HALQERVHLLQAAGREVILVGDINIVRQPMDSGEGPVRSSAEQHYSHPARRILDDWCAPK
GPMIDVVRESWPQRDDMFTCWNQKLDARSANYGSRIDYVLCTPGLRPWIKGGDILPKVYG
SDHCPVYVDLHESIITSEGVTLHLRDMLNPKDRPSSTSPVYPNDAKREAPEPPRFATKFM
DEFSGRQTSLKSFFGGESKRAQEKTNGASLTTSVSASASPTPTPTASELSTAVQDTPPVP
AASKFDPSKIVLLPQAPEEGLSAPFNLARAAFSSLDNPSPVHSRELSSKTNGGTPVKATS
SSKQEKSYPKPIDMTLDDDEDDEPMLISSKSKNKPPPKPTKSSSSGSKLASSQAKLSSFF
SQPNTEGKRKSPPLPSSALPTSKRPSLAPIPQSNTDPFVASPSGTTAEDESQGMTEEENQ
LISQAIAEADAERAEKNAKAAPQWSSLFAKKLPPLCTVHHKPCKDFIVMKPGPNKGKRFW
LCSLPVGAGYDMGRSKRPREDVNPKFRCNFFLWDSANSRKETPNEGKEKKEPEKEEKKL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaggatactcacatggaacgttaacgtcttacggacgtgcctggattaccacccattc
agctcaatgcaaaagaagaacattgaaggcttactcgatgaactggatgcccagatattt
tgcttccaagaacataaaacggtccgcacgcgtctagagaagtcaatggcttgcccgggc
ccatacgatggtttctggacttttcctcgttccaagactggctatagcggagtctgcact
tatgtggattctcgctattgcgtgcctctcaaagcggaggaaggtattaccggactactt
ttaggcgaccggctgagtacgatgaagccaccatggaccgatgtggaaagaataggcagt
tatcctgatgtgaatgatatggagtggatggatgagctggacgggacaaagtttgatgtc
aagaagctcgacatggagggacgggccgtggtatgcgatttcgggttgttcgtcttattc
aatctttattgcccaaacgagacaaatggtgctaggcgaccatacaaaatgaactatctg
cacgctctccaagaacgcgtgcacctccttcaggctgctgggcgcgaggtcatccttgtg
ggggatatcaacattgtacgccagccgatggattccggagaaggtcctgtgaggtcttca
gcggagcaacattattcccaccctgccaggcggatactcgatgactggtgtgcgcctaaa
ggacctatgatagatgttgtccgagagagctggcctcaaagggatgatatgtttacctgt
tggaatcagaaactcgacgccagatcggcaaactatggaagccgtattgactatgtacta
tgtacacctggtcttcgtccatggatcaagggtggcgatatacttcccaaggtgtacgga
tctgaccactgtcccgtgtatgtcgacttgcacgagtccatcatcacttcagaaggggtg
actctccaccttcgcgatatgcttaatcccaaagaccgaccatctagcacgtctcctgtg
tacccaaatgatgccaagagggaagcacctgagccgccaaggtttgcaaccaaatttatg
gacgagttctcagggagacagacaagcctaaagagtttctttgggggagaatcgaaaagg
gcacaggagaagacgaatggggccagtcttactacaagtgtgagcgcgagtgctagtccg
actccaacacctacagcttcagaattatcgacggcggtgcaagatactccgccggttcca
gcagcatccaaattcgatccctcgaaaattgttttactcccacaagcaccggaagagggc
ctttccgccccattcaaccttgctcgagccgctttcagttctttggacaatccttcccct
gttcatagtcgagaattatcgtccaaaacaaatggcggcaccccagtaaaggcaacctca
tcgtccaagcaagagaaatcttacccaaagcccatagacatgacattagatgacgatgag
gatgatgagccaatgttgatatcgtcaaaatcgaagaacaaacctccaccaaaacctaca
aagtcatcatcgtctggttcgaaattagcctcctcacaagccaagctctcttcatttttc
agtcaacctaataccgaaggcaaaagaaaatccccgccattaccgtcctcagccctccct
acctcaaaacgcccctcgttggcaccaattcctcagtcaaacactgacccgtttgttgcg
tctccttccggcacaactgcggaagacgagagccagggcatgacagaagaagagaatcag
cttatttcgcaagctattgcggaagctgacgcagaaagagcagagaaaaatgcaaaagct
gctccgcaatggtccagcctctttgccaaaaaactgccgccgttgtgcacagttcaccat
aaaccgtgcaaggactttattgtaatgaagcctggacctaataaggggaaaagattctgg
ctatgctccctgccggttggtgcagggtacgatatggggagatcgaagagaccgagggaa
gatgtaaatcccaaattccgctgcaattttttcctctgggattctgccaattcgagaaaa
gagacgccgaatgaagggaaagagaagaaggaaccggagaaagaagagaagaagctgtag
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