Cryptococcus neoformans var. grubii H99: CNAG_04362
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Entry
CNAG_04362 CDS
T08175
Name
(RefSeq) ATP-dependent RNA helicase DBP5
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03013
Nucleocytoplasmic transport
cng03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNAG_04362
03015 mRNA surveillance pathway
CNAG_04362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_04362
Enzymes [BR:
cng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CNAG_04362
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CNAG_04362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
DUF4246
Motif
Other DBs
NCBI-GeneID:
23887797
NCBI-ProteinID:
XP_012051508
UniProt:
J9VS53
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All DBs
Position
9:672574..675106
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AA seq
546 aa
AA seq
DB search
MSDAQAPPASTSWADMVDEDEKQKQEQNMSNQNDGWGETATETSAPAPPPASAPASSNNN
EGWGEAAPNAPADNGWGDAGASNGGNGSNNNDGWFDAPVPPSSRPPRKEASDIQLQDDTE
GLINNTFQVEIKLADLQGDPNSPLYSVQSFKELNLHEDLMKGIIAAGFQKPSKIQEKALP
LLLSNPPRNLIGQSQSGTGKTAAFTLNMLSRVDPTIPTPQAICIAPSRELARQIQEVVDQ
MGQFTQVGTFLAIPGSWSRNARIDKQILIGTPGTLVDMLMRGSRILDPRMVRVLVLDEAD
ELIAQQGLGEQTFRIKQLLSPNVQNVLFSATFNDDVQEFADRFAPEANKIFLRKEDITVD
AIRQLYLECDSEDQKYEALSALYDCLVIGQSIVFCKRKVTADHIAERLISEGHAVASLHG
DKLSQERDAILDGFRNGETKVLITTNVIARGIDIPAVNMVVNYDVPDLGPGGGGPDIETY
IHRIGRTGRFGRKGCSVIFTHDYRSKSDVERIMNTLGKPMKRIDARSTTDIEQLEKALKL
AMKGPA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcacaggcccctcctgcctcgacctcgtgggctgatatggtcgatgaagat
gaaaagcaaaaacaggaacaaaacatgagcaatcaaaacgacggatggggagaaactgcg
accgaaaccagtgcccctgctcctcctcctgcttccgcacccgccagcagcaataacaac
gagggctggggtgaagcagcccccaatgcccctgcagataacggatggggtgatgctgga
gcttccaatggcggtaacggttcgaacaacaatgacgggtggttcgatgcccccgtgcct
ccgtcttctcgacctccaaggaaggaggcttccgacatccaattgcaagacgacactgaa
ggtttgattaacaacaccttccaggtcgagatcaaacttgccgatctccaaggggacccc
aactcccctctttactctgtccaatctttcaaagagcttaacctccacgaggatctcatg
aagggtatcattgccgctggtttccaaaaaccttccaagattcaagagaaggctcttcct
ttgcttctctccaatcctcctcgaaacctcatcggacaaagtcagtccggtactggtaag
actgctgcctttaccctcaacatgttgagccgagtcgatcctaccatccccacccctcaa
gccatctgtatcgctccttcccgagaacttgcccgtcagattcaagaagttgtcgaccaa
atgggtcaattcactcaagtcggcactttccttgccatccctggctcttggtctcgtaat
gcccgaattgacaagcagatcctcatcggtacccctggtacccttgtggacatgttgatg
aggggctcaaggattttggaccctaggatggtcagggtgttggttcttgacgaggctgac
gagttgatcgcgcagcaaggtttgggtgaacagactttcaggatcaagcagctcctttcc
cccaacgtccaaaatgttcttttctctgctactttcaatgatgacgtacaagagttcgcc
gaccgattcgcccccgaagccaacaagattttcttgaggaaagaagatattactgttgat
gcgatcaggcagctttaccttgaatgcgacagcgaagaccagaagtacgaagccttgtct
gccctgtacgactgcttagtcattggacaaagtatcgtcttctgcaagcgaaaagtcacc
gccgaccacattgctgaacgtcttatttccgaaggtcatgccgttgcctctctccacggt
gacaagctctcccaagaacgtgatgctatccttgacggcttcaggaatggtgagaccaag
gttctcatcaccaccaacgtcattgctcgaggtatcgatatccctgctgtgaacatggtt
gttaactacgacgtgcccgacttgggacctggcggtggtggtccggacatcgagacctac
atccatcgtatcggtcgaactggtcgattcggccgaaagggttgttctgtcatcttcacc
cacgactaccgatccaagtccgacgttgagcggatcatgaacactctcggaaagcctatg
aagaggattgatgctaggagtacgacagatatcgagcagttggagaaggctttgaagttg
gctatgaagggaccggcgtaa
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