Cryptococcus neoformans var. grubii H99: CNAG_04393 Help Entry CNAG_04393        CDS       T08175                                  Name (RefSeq) RNA helicase   KO K18664   antiviral helicase SLH1 [EC:5.6.2.6] Organism cng  Cryptococcus neoformans var. grubii H99 Brite KEGG Orthology (KO) [BR:cng00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cng03019]     CNAG_04393 Enzymes [BR:cng01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      CNAG_04393 Messenger RNA biogenesis [BR:cng03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      CNAG_04393 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sec63 DEAD SNRNP200_wHTH ResIII Helicase_C AAA_11 AAA_22 DEXQc_Suv3 His_biosynth Motif Other DBs NCBI-GeneID:  23887826 NCBI-ProteinID:  XP_012051518 UniProt:  J9VWX3 LinkDB All DBs Position 9:complement(742850..752459) Genome browser AA seq 1745 aa AA seqDB search MSVQHYLGTLFQPQPPTFEDSWKAVISSWGSSQLRAQATDDDEPVLETSPWPSVLNYLSD TGLPSMTLEPPPIESTPAPESSSSTKTDLADRLRQHIPTTFGSLVNLLSTPRSNDDIQSE LIEIMGFEGDALSLIEELLKPGARQNVVDSCLHSISSAQDKKEAKPALMDKPTYLPNARM TVKGKVKDRKKIIDISDIVGSAEDINKRLQEQIEGPKAMFSEDGPKMVDQEILPHVYTAT GNKFIPLSHGGKFALPEGTKREYMDTYEEVIIPPANPVPPKKTERPVKVAELPPMARGCF PKYIQLNRMQSIVQPTAMNTNENMLICAPTGAGKTDVAIMAIIRVLSQHVMDGPTSHSSG FNINRNAFKVIYVAPMKALAAEIVSKFAKRLAWLNIKVRELTGDMQLTKQEIEETQIIVT TPEKWDVVTRKPTGEGELASKVKLLIIDEVHLLAEDRGAVIETIVARTLRQVESSQSLIR IVGLSATLPNYVDVGDFLRVNRYQGLFYFDASFRPVPLEQHFIGVSGKPRSAVSARNMDR VVFEKVSELVEAGHQVMVFVHARRDTVKTAQTLKEMALEEGVSTFFQTDGHVKFSQYRAE ISKSKNKEMKELFDAGFGIHHAGMLRTDRNMMEKMFGDGCINVLCCTSTLAWGVNLPAHA VIIKGTQVYDTGKGSFMDLSVLDVLQIFGRAGRPGYATSGVGFICTTHDKVDHYVTAVMS QTPIESKFIPGMTDALNAEVALGTITNVQEAMQWLSYTYLFVRMKKNPWVYAMAHDVTKD DPQLGNKRNELIVQAARLLQKARMVRYDDLANTFGITDLGRIAAKYYLRFSTIEIFNSKF NPRMSNADLFQMLCEATEFEQIQLRDSEVEELEAIIGSGVIPLEVAGGAINKRNKVNILL QAHISNVYINDFALVSDAAFVAQNAGRIIRALLEIALSRNWANCSYLLVELSKCIERRQW VYDHGLAQLKVLQRETIHKLTQYTPDSMTISDFRDMTAQENGEFIHMNEKHGQAVLDAAM MFPTVNLTHTLRPITHDLIQITVKATPQFKWHNKISGSSEPFYVWVQDKEGLNIYQWRSI RVTPSTTAIDIDFFLPFDDVPPDSISIISISDKWLWSYEQLVIQLSDLIMPPPPKESTQI LGIPFLRRSCFNDPQLEQRYAQTLDTLNTIQSHAFWMLYNTSMSAVVSAPVGSGKTLLAE GAIWNAFRHNKESVVLIMVPERYAVHEAVARLRNLCPPKRRVAVKPLFNVSEFDQLLSGG PAIGVTTPFALLNNEKIDNFLNTPRLELYVFEDLHLLDEVYELAVSKILTFARIARTRIV GTTSSLIDPSDLAEWLGIDPGPLDQWGRPVASQPPALFSFAPSDRGNHISVSIKSFTIPH GPTLLRSMIKPTYDILKSVIGGAIIFVPSVQACATVAADLVTQSGTEMNVNGFLSRSRDE VEPFAERLKDERLFEPVLHGIGYITRDIAPTDLAIVLELFASGIIRAIIAPRQSCWTLPV RGDSVIIMGTQYVSMKTRPEGKGPKGKPEKHLVSYSAQELVKMQGFAAASAAPTAPGGRM FIMCQAEQQVMISRMLKEGLPLESKILDLLSRRSTPSSSVDPRAIQALNNFFKGRRPPPR PTVDRPRRPDGRKADMMDIVNWSFLSVRVKSNPSYYQLVKGSEAEGISRVIDGWFDAMDG IKVETVEEQRRLTVEDAEAHEDKEGDAEEADVNSDQKGGVANGGGDGTLNLDESEQKGTA SEKSG NT seq 5238 nt NT seq  +upstreamnt  +downstreamnt atgtctgtccaacattacttgggcaccctttttcagccccaacctccaacatttgaggat agttggaaagctgttatttcaagctggggctcctctcagcttcgtgcccaagccaccgat gatgatgaaccagtcttggagacctcaccatggccgtcggttctaaactatttgtcggat actggtctgccatctatgactctggagcctcctcctatcgaatccacgcccgcgcccgag tcttcatcgtcaacgaaaactgatttggccgatcgtttgcgccagcacattcctaccacc tttggatcacttgtcaaccttctgtctaccccgcgctcaaacgatgatatacaatcagag ctgattgagatcatgggtttcgagggcgatgccttgtcgctgatcgaggaattgttaaaa ccaggagcgaggcaaaatgtggtcgacagctgtttgcactctatctctagtgcgcaggac aagaaggaagcgaagcctgccctgatggacaaacccacatatctaccaaatgcaaggatg acagtaaagggaaaggtcaaggatagaaagaaaatcatagacatctcagacattgttgga tcggccgaagatatcaacaaaagattacaagagcagattgaaggtcccaaagcgatgttc tcggaggatggtcccaaaatggtcgaccaagagattttgcctcatgtttacacagcaaca ggaaacaagttcatccctctctcccatggcgggaagttcgcgcttcctgagggtacaaag cgagaatacatggatacgtatgaagaggtgattatacctccagccaatcctgtaccgcct aagaaaacagagcgtcctgttaaagttgctgaattgccacccatggctagagggtgtttc cctaaatacatccagttgaataggatgcaaagtatcgtacagcccactgctatgaacaca aacgagaatatgttgatttgcgcgccgactggtgccggtaaaactgatgttgctatcatg gcaatcatccgtgttctgtctcagcatgttatggacggtcctacctcccactcttcaggc ttcaacatcaatcgcaacgctttcaaggttatttatgttgcccccatgaaggcccttgct gcagaaattgtgtctaaatttgcaaaacgtcttgcatggctcaatatcaaggtcagagag ttgactggagacatgcaattaacaaagcaagagatcgaagaaacacagatcatagtgaca actcctgagaaatgggatgtggtgactagaaaaccgacaggtgaaggagaactggcgtct aaagtcaaattgcttatcatcgatgaggtccatttgcttgcggaagatcgaggtgccgtc attgagaccattgtggccagaacactcagacaagttgaatcaagccaatctctcattcgc attgtcggcctcagtgccaccctgccgaattatgtcgacgttggagatttcttgagggta aaccggtatcaaggtcttttttatttcgacgcttctttcagaccagttcctctcgagcag catttcattggtgtttctggaaagcctcgttcagccgtctctgcacgtaacatggatcga gtcgtttttgaaaaggtctctgaacttgtggaggctggtcatcaagtaatggtgtttgta catgccaggcgagacactgtcaagactgcacagactctcaaggaaatggctttagaagaa ggtgtttccactttcttccagaccgatggtcatgtgaaattcagtcagtacagagcagag atttcgaagtctaaaaacaaggagatgaaggagctattcgacgccggattcggtatccat catgccggtatgctgagaacagacaggaatatgatggaaaagatgtttggggatggttgc attaacgtcctatgctgcacctcaactttggcatggggtgttaatcttccagcacatgct gttatcatcaaaggcacccaggtttatgacactggcaaaggttcgtttatggatctctct gtcctagacgtccttcaaatcttcggccgagctggccgacctggatacgcaacaagtgga gtcggcttcatatgtaccacccacgacaaggttgatcactatgtgacagcggtcatgtct cagactcctatcgaatccaaattcatccccggcatgacagatgcccttaacgctgaggtg gctttaggaacaattaccaatgttcaagaagcaatgcaatggttgagttacacctatctt ttcgttcgcatgaagaagaacccttgggtttatgccatggcccatgatgttacaaaagat gacccgcaacttggcaataagcgcaacgagctcattgttcaagctgctcgtcttcttcaa aaagctaggatggttcgatatgatgacttagccaacacattcggtatcacagatctaggt cgcattgcagccaagtactacctcaggttctctactattgagatattcaacagtaaattc aatcctcgaatgagcaatgcagatctgttccagatgctgtgtgaagcgactgagttcgag caaattcagcttcgagacagcgaagtggaagagcttgaagccattatcggcagcggtgtc atcccattggaagttgccggtggtgcgatcaacaagcgcaacaaagtcaatatcctgctc caagcgcatatctccaacgtctacatcaacgattttgctctcgtttctgacgctgcattc gttgcacaaaatgccggacgtattattcgcgcgttgcttgagattgctcttagccgtaac tgggccaattgctcctacctgttggtcgagctcagcaaatgtattgaacgccgacaatgg gtttacgatcacggtctcgcccagctcaaggtgttgcagcgcgaaaccattcacaaactt actcaatatacgcccgatagcatgaccatctctgatttccgagacatgactgctcaagaa aatggcgagttcattcacatgaacgagaaacatgggcaggctgtcttggatgccgccatg atgttcccaactgtcaaccttacccacaccttgcggccgatcacccatgatctgatacaa atcaccgtaaaggccacaccacaattcaaatggcataacaagatctctggtagcagcgaa ccgttttatgtatgggtacaagacaaagaaggtttaaatatctatcaatggcgtagtatc cgcgtcaccccctcaactaccgctatcgacatcgactttttcctaccctttgatgatgtt cctccagactcgatatcaattatctccatatccgacaaatggctatggtcctatgagcag ctcgtcattcagttgagcgatctcataatgccgccacctccgaaggaatccactcaaatt cttggtattccattcctgcgccgctcctgcttcaatgatccccagctagagcagcgatat gctcagacgttggacactttgaatacaatccaaagccatgccttctggatgctttataac acttctatgagcgctgtcgtctctgctcctgttggaagcggaaagactttactggcggag ggggctatatggaatgctttccggcataacaaagaatcggttgtcttgataatggttcct gagcgctacgccgtccatgaagccgttgctagattgcgaaatttatgtcctccaaagcga agagtagccgtcaagcctcttttcaacgtgtccgaatttgaccaacttctctctggaggg cctgctattggggttacgacaccctttgcgctcctgaacaatgaaaaaattgataatttc ctgaatactccacgtttagagctgtatgtctttgaagatctacatcttctcgatgaagtg tacgaacttgccgtatcaaaaattttgacttttgcccgcattgcacgaacccgaatcgtt ggtacgacatcatctcttatcgatccctctgatcttgctgaatggcttgggattgaccct gggccattggatcaatggggaagacctgtcgcttcacaacctcccgctttgttcagtttc gctccctcagatcgtggcaatcatatttctgtgtccatcaaatcgttcacaattccccac ggtcctaccttacttcgttcgatgatcaaacccacctacgatattctcaaatccgtgata ggcggtgccatcatttttgtgccatccgttcaagcttgcgccaccgttgccgccgatctt gtcactcaatcgggaaccgagatgaatgtcaatggcttcctttcacgatctcgcgacgag gtcgagccgttcgccgaacgcttgaaagatgaaagattgtttgaaccggtgctccatggt atcggttacattactcgtgacattgcaccgacggatctcgccattgttctcgagcttttt gcgagtggtattatccgtgctatcatcgcccctcgtcaatcgtgttggacacttccagtg cgaggtgacagcgtcatcataatgggcacgcagtacgtgagcatgaaaacgagacccgaa ggcaaggggcccaaaggaaaacctgaaaagcacctggtaagctattcggcgcaagagttg gtgaagatgcaaggcttcgctgctgcttcggcggcccccactgcccctggtggaaggatg tttatcatgtgccaagcagagcagcaagtcatgatttctcgaatgctcaaggagggtctc ccattggaatctaaaatccttgatcttctttcacgtagatctacaccatcctcttcggtc gacccaagagctatccaagctcttaacaattttttcaagggtcgcagacctcctcctcgc cctaccgtcgacagaccccgccgacctgacggcaggaaagcagacatgatggacattgta aattggtcattcctttctgtcagagtaaagagcaatcctagctattaccagctcgttaag gggtcagaagcggaaggtatctcaagagtaattgacggatggtttgatgctatggatgga ataaaggtggagactgttgaggagcagaggaggctgaccgttgaggatgcggaagcgcat gaagataaagagggtgacgcggaggaggcagacgtaaattctgaccaaaagggtggagtt gcgaacggtgggggagacggtacgctaaatttagatgaatcagaacagaagggtacggcg agcgaaaagtcaggatag

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