Cryptococcus neoformans var. grubii H99: CNAG_04441
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Entry
CNAG_04441 CDS
T08175
Name
(RefSeq) polyadenylate-binding protein, cytoplasmic and nuclear
KO
K13126
polyadenylate-binding protein
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03015
mRNA surveillance pathway
cng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CNAG_04441
09123 Folding, sorting and degradation
03018 RNA degradation
CNAG_04441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_04441
03041 Spliceosome [BR:
cng03041
]
CNAG_04441
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CNAG_04441
mRNA cycle factors
Stress granule specific factors
CNAG_04441
Spliceosome [BR:
cng03041
]
Complex C
Other components
Complex C specific factors
CNAG_04441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RBD_DEAH11
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
23887859
NCBI-ProteinID:
XP_012051803
UniProt:
J9VUR9
LinkDB
All DBs
Position
9:complement(875818..879064)
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AA seq
670 aa
AA seq
DB search
MSVETATSPAPAAETPAAPAPAPATQTTPAEGAPTPAAAAPGGNAVSASLYVGELDPSVT
EAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEHLNYSLIKGQSCR
IMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILSCKVGTDENGKSRGFAF
VHYSTGEAADAAIKAVNGMLLNDKKVYVGHHVGKKERLSKVEELRAQFTNVYIKNVDLEV
TDAEFEDLVKPFGPTISVALSRDEKGVSKGFGFVNYEHHESARKAVDELNEKEVNGKKLY
AGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYIKNLDDEWDDDRLRAEFEAFGTITS
SKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVALAQRKDVRRQALESQ
IAQRAQQRMQYGTGFPGMQGYMGQPMYGYPPMPGYGQPMPGMPPVRGPMMGYPGAPQNMM
QSRPRFNPNGQPLPGGVPAYGMPPQVPYPGAPGYPVRPGGARIPAAPNANGPRNGGPSPV
GAPQGLPAGSMPRGGQMPARPHEQAAPAPQAGRLDAQSLARAAPAEQKQMLGEALYPLIH
ETQPELAGKITGMLLEMDNAELLHLVESQPALQEKVDEALRVLAEWGKDEKPAAAEGAEE
PKKEEEETKE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcgaaaccgctacatcccctgctcctgctgctgagactcccgcggctcctgct
cctgctcccgccacccagaccacccccgccgagggtgctcctactcctgctgccgctgcc
cccggcggcaacgccgtgtccgcctctctctatgttggcgagctcgaccccagcgtcacc
gaggctatgctcttcgagatcttcaacatgatcgggcctgttgcttccatccgtgtttgc
cgtgacgccgtcactcgacgatctctcggttacgcctacgtcaactacctcaacgccgcc
gacggtgagagggccctcgagcacctcaactactccctcatcaagggtcagtcatgccga
attatgtggtctcagcgtgaccccgccttgaggaagactggtcagggaaacatcttcatc
aagaacctcgaccagagcattgacaacaaggctctccacgacacttttgccgctttcggt
gacattctttcttgcaaagtcggtaccgacgagaatggcaagagccgaggcttcgccttt
gtccattactctaccggtgaggccgccgacgctgccattaaggccgtcaacggtatgctt
ttgaacgacaagaaggtctacgtcggtcaccacgtcggcaagaaggagcgtctctccaag
gtcgaggagttgcgtgcccagttcaccaacgtctacatcaagaacgttgacctcgaggtc
actgacgctgagttcgaggacttggtcaagcctttcggccccaccatctctgttgccctt
tccagggacgagaagggtgtctccaagggtttcggtttcgtcaactacgagcaccacgag
tccgcaaggaaggctgttgacgagctcaacgagaaggaggttaacggcaagaaactctac
gccggtagggcccagaccaagtctgagcgtgaagctgagctcaagaagagccacgaggag
aagaggctcgagaacgaggccaagagcgccggtgtcaacctttacatcaagaaccttgat
gatgagtgggatgacgaccgtctccgtgccgagttcgaggctttcggtaccatcacttcc
tccaaggttatgagggacgacagtggtgtctctaggggctttggtttcgtctgctactct
tcccccgacgaggccaccaaggctgtctctgagatgaacggcaagatgatcggcactaag
cccctctacgtcgctcttgctcagcgaaaggacgttcgtcgacaggctctcgagtctcag
attgcccagcgagctcagcaaagaatgcagtacggtactggtttccccggcatgcagggt
tacatgggtcagcctatgtacggttaccctcccatgcccggatacggccagcccatgcct
ggtatgccccctgtccgtggccctatgatgggttaccccggtgctccccaaaacatgatg
cagtcccgaccccgattcaaccccaacggccagcccttgcccggtggtgttcccgcctac
ggcatgcctcctcaagttccttaccctggtgctcctggctatcccgtccgacccggtggt
gcccgaatccctgctgcgcccaacgccaacggtccccgtaacggcggccccagccctgtc
ggtgctccccaaggtcttcctgccggttccatgcctcgaggtggccagatgcccgctcgt
ccccacgagcaggctgcccccgctccccaagctggccgactcgatgcccagtctttggcc
agggctgctcctgctgagcagaagcagatgctcggtgaggctctttaccccttgatccac
gagacccagcccgagctcgccggtaagatcactggtatgcttctcgagatggacaacgcg
gagcttctccacctcgtcgagtctcagcccgctctccaggagaaggttgacgaggctctc
cgagttctcgccgagtggggcaaggacgagaaacccgctgctgctgagggtgctgaggag
cccaagaaggaagaggaggagaccaaggagtaa
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