KEGG   Cryptococcus neoformans var. grubii H99: CNAG_04444
Entry
CNAG_04444        CDS       T08175                                 
Name
(RefSeq) splicing factor 3B subunit 1
  KO
K12828  splicing factor 3B subunit 1
Organism
cng  Cryptococcus neoformans var. grubii H99
Pathway
cng03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CNAG_04444
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cng03041]
    CNAG_04444
   03036 Chromosome and associated proteins [BR:cng03036]
    CNAG_04444
Spliceosome [BR:cng03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    CNAG_04444
 Complex B
    CNAG_04444
 Complex C
   U2 SnRNP specific factors
    CNAG_04444
Chromosome and associated proteins [BR:cng03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    CNAG_04444
SSDB
Motif
Pfam: PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ SF3b1 HEAT_EF3_N HEAT_2 Vac14_Fab1_bd HEAT HEAT_ECM29 Adaptin_N Htt_N-HEAT_1 XMAP215_CLASP_TOG RRP12_HEAT MMS19_C
Other DBs
NCBI-GeneID: 23887862
NCBI-ProteinID: XP_012051805
UniProt: J9VX11
LinkDB
Position
9:complement(882270..886025)
AA seq 1154 aa
MSDEEYPQLQSYTAPQDILDEHAELADEDETPDAFQDKARSKQVAARQSDYHLRRFNRTD
GQGEGEDESYEERMRRINLEKEEEKVRRYKEKMEKEEKERGEMQVDDKTPPRELTGGDTP
PRKALVGDETPPRAQAGDVTPPRKKRRWDTEPEIKQEVKEEVKEEVKEEEPRKRRSRWDQ
TPAEAPPEKKRSRWDQTPAQTASSSVLAAPTNLAKPSGIVLVEDKRYRRMTDEELDSLLP
GSEEGYVVVPVPDDYHPAPSVRKMVPQQAEAGFMMQDETDAARARAAAGGLQGTTEQTEI
DGIGTLQFLKPEDTQYFAKVLGEGGGEENDAEYTVEELKERKIMRLLLKIKNGTPPVRKT
ALRQITDRAREFGAGPLFDKILPLLMERTLEDQERHLLVKVIDRVLYKLDDLVRPYVHKI
LVVIEPLLIDEDYYARVEGREIISNLAKAAGLAHMISTMRPDIDHVDEYVRNTTARAFSV
VASALGIPALLPFLRAVCRSKKSWQARHTGIRIIQQIAIMSGCAVLPHLRNLVDAIADGL
KDEQQKVRTMTALALAGLAEAAAPYGIESFDNVLKPLWLGIRQHRGKTLAAFLKAIGYII
PLMDPEYAGYYVRECMPILIREFQTSDEEMRRIVLQVIKQCASTEGVTPSYIKEEVLPEF
FKAFWVRRMALDKRNYKQLVETTVELANKAGVAEIVGRTVNDLKDESEPFRKMVMETITK
VVSNIGAADIDERLEVLLIDGIIYSFQEQTFEDTVMLDGFATVVASLGPRVKPYLPQIVS
MILWRLTNKSAKVRMLAADLTTKLAPIIKSCKEDVLLSKLGVVIFEQLGEEYPDALGSLI
AAEGAIANVVGMTEMNPPVKDLLPRMTPILRNRHEKVQEATINLIGRIADRGAEYVPAKE
WMRICFELLDLLKAHKRAIRRAAVNSFGYIAKAIGPQDVLSVLLTNLKVQERQSRVCSTV
AIAIVAETCGPFTCIPAILNEYRTPELNVRNGCLKALAFVFEYVGEMSKDYIHSVVGLLE
DALTDRDHVHRQTACAIVKHLAIGVAGLGYEEALTHLLNLVWPNIFETSPHVIGGVMDAI
EAMRLGIGSGVVLSYVLQGLFHPARRVREVYWRMYNTLILGSSDAMVPFYPALGSESDLA
SGQDYTRHQLMMWI
NT seq 3465 nt   +upstreamnt  +downstreamnt
atgtctgacgaagagtacccacagctccagtcgtacacggctccacaggacattctcgac
gagcatgccgaactcgcggacgaggatgagactccggatgccttccaggataaggcaagg
tcgaagcaagtagctgctagacaaagcgactaccacttgcgtaggttcaacaggacagac
ggccagggtgaaggtgaggatgaaagctatgaggaacgtatgaggcgaatcaatttggag
aaggaggaggagaaggttagaagatacaaggaaaagatggagaaggaggagaaggagaga
ggagagatgcaggtggacgacaaaactccgccgagagagctcacaggtggcgatacccca
ccacgcaaggctcttgttggggatgagacaccccctagagcccaggctggtgacgttact
cccccccgcaagaagcgaagatgggatactgagcctgaaattaagcaagaagtcaaggaa
gaggtcaaggaggaggtcaaggaagaagaacccagaaaacgtcgttctcgatgggatcag
actccggctgaagcaccgcccgagaaaaagcgttcccgatgggatcaaactcctgcgcag
actgcatcttccagtgtcctcgctgctcccaccaatctcgccaaaccatccggtatcgtc
ctggtcgaagacaagcgataccggcgcatgactgatgaagagcttgactcattgcttcct
ggatctgaagaaggttatgttgtggtgcctgtaccggacgactaccaccccgccccttca
gttcgcaagatggttccccagcaggctgaagctggattcatgatgcaggacgaaacagat
gccgcacgagctcgagcagcagctggtggcttacagggtacaactgagcaaacagagatt
gatggaattggaactcttcaattcctcaaacctgaagatacccagtactttgccaaggta
ctcggagaaggcggtggtgaagaaaacgacgcagaatacactgtcgaagagctcaaagaa
cgcaaaatcatgcgacttttgctcaaaatcaagaacggtacccctcctgtccgtaaaacc
gctttgcgtcaaatcaccgatcgtgcgcgagagttcggtgcgggtccattattcgacaaa
atcctccctcttcttatggagcgtacgctcgaagaccaggaacggcatttgcttgtcaag
gtcatcgaccgtgttctctacaagcttgatgatcttgttcgtccatatgtccacaagatc
cttgtcgtcatagagcctcttcttatcgatgaggattactacgctcgagtcgaaggtcga
gaaatcatttccaacctcgccaaagcagccggtcttgcccacatgatctccaccatgcgt
cccgatatcgaccacgtcgatgagtacgtccgtaacaccactgccagagccttttcggtt
gtagcctccgctctcggtatccctgctcttcttcctttccttcgtgctgtctgtcgatca
aaaaaatcatggcaggcgaggcataccggtatccgtattatccaacaaatcgccattatg
tcaggctgcgcagtccttccccatcttcgtaaccttgtcgacgccattgccgatggtttg
aaagatgagcaacaaaaggttcgaactatgaccgctctggcccttgctggtcttgccgaa
gctgccgcgccttacggtatcgagtctttcgataacgttctcaaacccttgtggctcggt
atcagacagcaccgaggtaagaccctcgccgctttcctcaaagccatcggttacattatc
ccgcttatggaccccgagtacgccggatactacgtgcgagagtgtatgcctattttgatc
cgagaattccaaacttctgatgaagaaatgagaaggattgtcttgcaagtcatcaagcag
tgtgcctccaccgagggtgttactccttcatatatcaaagaagaggttctccccgagttc
tttaaggccttttgggtcaggcgtatggcgttagacaagaggaattacaaacagcttgta
gagaccactgtcgagctggccaacaaggctggtgtcgcagagatcgtcggtaggacagtc
aatgatttgaaggacgaaagtgaacctttccgaaagatggttatggagaccattaccaag
gtggtttccaacattggtgctgccgatatcgacgaacgtctcgaagtcttgttaattgat
ggtattatctactccttccaggagcagacttttgaagacactgtcatgcttgacggtttt
gcaaccgttgtcgcctctctcggtcctcgtgtcaagccttatcttccacaaatcgtttcc
atgatcctttggagattgactaacaaatccgccaaggtacgaatgttggcagctgatttg
actactaagctggcaccgattatcaagagctgtaaggaggatgtactgctgagcaagtta
ggtgttgttatctttgagcagttgggtgaagagtatcccgacgctttgggaagccttatt
gccgctgagggagctatcgcgaatgtcgttggtatgacagagatgaacccacccgtcaag
gatcttctcccgcgaatgacccccattcttcgaaatcgacacgaaaaggttcaagaagca
accatcaacttgatcggtcgtattgccgatcgaggtgccgaatacgtccctgctaaggaa
tggatgcgaatctgtttcgagcttcttgacctgctcaaggcccacaagcgagcgattcga
cgagcggctgtcaactctttcggttatatcgcaaaggctattggtcctcaggatgtgttg
agtgttctcttgacaaacttgaaggtacaggagcgacagagtagggtttgtagtaccgtc
gctatcgccattgtcgccgaaacctgtggtcctttcacttgtatccccgctattcttaat
gaataccgaactcccgaacttaacgttcgaaatggttgtctcaaggcccttgccttcgta
ttcgaatacgtcggggaaatgtccaaagattatatccactcagtcgtcggcttgctcgaa
gatgctctcactgaccgagatcacgtccaccgacaaacggcttgtgccattgtcaagcat
ctagctattggtgtcgccggcttgggttacgaagaggcactcacacatttgttgaacctt
gtttggccaaacatctttgaaacgagtcctcacgttattggtggtgtgatggatgctatc
gaagcgatgagacttggtattggatctggtgtcgtgttgagttatgtgttgcaagggttg
ttccaccctgccaggcgagtaagggaagtttactggaggatgtacaacactctgatcctt
ggatcatcggatgcgatggtgcctttctaccctgctctgggttcagagtccgatttggca
tctggtcaggattacacaaggcatcagctcatgatgtggatttag

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