Cryptococcus neoformans var. grubii H99: CNAG_04839
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Entry
CNAG_04839 CDS
T08175
Name
(RefSeq) exosome complex component MTR3, animal type
KO
K12587
exosome complex component MTR3
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNAG_04839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_04839
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CNAG_04839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
23888216
NCBI-ProteinID:
XP_012052241
UniProt:
J9VVF4
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All DBs
Position
10:267625..268811
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AA seq
268 aa
AA seq
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MSIFDRRRIPAPEISIPPVYESLSGDAQAGPSTRTDRTDQESRPIFLKTGLISQAHGSGY
IEAGGVKIACSVYGPRPKPPPYSPQGTLNLEVKFAPFASDPRRAPLRDTEPLPLSNLLTQ
LLLPTLHLHLLPKSSIDVYLLVLESDTLTNVLSAGLTVASAAVADAGIEMAALGVGGAVA
SIGGDEKQGRRRVVIDPSLEEEKQSDVKVMVGTMPALGKMTNVWLTGEAEVDEACNMIEQ
AIEASRETHSILAEALVEGAGERGIAAA
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtccatttttgaccgccgccgtatcccagcacccgaaatatccatccctcctgtctat
gaatccctttccggcgatgctcaagcaggtccttctacccggacagacagaactgaccag
gagtcaagaccgatattcttaaagacggggttgatcagtcaggcgcatggcagcggatat
atagaagctgggggtgtcaagattgcttgctccgtttacggacccagacccaaacctcct
ccatactcccctcaaggtaccctcaaccttgaagtaaaatttgccccatttgcctcggac
cctcgccgtgcgcctttacgtgataccgaaccgcttcccttatccaatcttctaactcaa
cttctcctccctacgcttcatctccacctccttcccaaatcatccattgacgtctacctc
cttgtcctcgaatctgataccctcaccaacgtcctctctgcagggctgactgtcgcttcg
gcagcggtagccgatgccgggattgagatggccgctttgggtgtgggaggagcggtagcg
agcatcggaggggatgagaagcaaggcaggagaagggtggtgattgacccgagtttggaa
gaggagaagcaaagcgatgtcaaggttatggttgggacgatgccagctctgggtaagatg
acgaatgtatggttgaccggagaagccgaagtggatgaggcttgtaacatgattgagcag
gccatcgaggcatctagagaaacacacagcatcctcgccgaggctttggtcgaaggggcc
ggagaacgaggtatagcagctgcatag
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