Cryptococcus neoformans var. grubii H99: CNAG_04980
Help
Entry
CNAG_04980 CDS
T08175
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNAG_04980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_04980
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CNAG_04980
mRNA degradation factors
5'-3' decay
Lsm complex
CNAG_04980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
23888339
NCBI-ProteinID:
XP_012048637
UniProt:
J9VR98
LinkDB
All DBs
Position
4:complement(136167..137154)
Genome browser
AA seq
135 aa
AA seq
DB search
MDALIPFTTSGSLVDLVDKKVLVILRDGRKLIGLFRSYDQFANFLLESCVERLHYKLEYA
DKDIGVLLVRGENVVALGEIDLIAEDMVPLQQVNLQEIEEKISAENKQRERDHAVKEAVL
SKMGFVNEGKEGDAY
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atggacgctctcatcccgtttacgacttccggttcactggttgaccttgttgacaagaaa
gtgctcgttatcttgcgagacgggaggaagttgataggcttgtttaggagttacgaccaa
tttgccaacttccttcttgaatcttgcgtagagagattacactacaaacttgaatatgca
gacaaggatattggagtgttgttagtgcgaggagagaatgtcgtggccttaggagagatt
gatctgatagcggaagatatggtacctttacaacaagtaaacttgcaagaaatcgaggaa
aaaatttccgcggagaacaaacaacgagaacgagaccacgctgtaaaagaagctgtgtta
tcaaaaatgggctttgtgaacgagggcaaggaaggcgatgcgtactag
DBGET
integrated database retrieval system
