KEGG   Cryptococcus neoformans var. grubii H99: CNAG_05096
Entry
CNAG_05096        CDS       T08175                                 
Name
(RefSeq) histone deacetylase 1/2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cng  Cryptococcus neoformans var. grubii H99
Pathway
cng03082  ATP-dependent chromatin remodeling
cng03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cng00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CNAG_05096
   03083 Polycomb repressive complex
    CNAG_05096
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cng03036]
    CNAG_05096
Enzymes [BR:cng01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     CNAG_05096
Chromosome and associated proteins [BR:cng03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     CNAG_05096
   HDAC complexes
    Sin3A-HDAC complex
     CNAG_05096
    BRAF-HDAC complex
     CNAG_05096
    REST complex
     CNAG_05096
    SHIP complex
     CNAG_05096
    MiDAC complex
     CNAG_05096
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     CNAG_05096
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    CNAG_05096
  Chromatin remodeling factors
   NuRD complex
    CNAG_05096
SSDB
Motif
Pfam: Hist_deacetyl CobT
Other DBs
NCBI-GeneID: 23888444
NCBI-ProteinID: XP_012048498
UniProt: J9VLP0
LinkDB
Position
4
AA seq 509 aa
MAPSTRLTNRPRLRVSYLWSPSLQRLSDDLPSNVGRSSMVHDLIKSLNLLDFEELKERFS
KNDKGEDEDGKSEDDDDNEADRIGVTNVGDKQGADGEHQGRTPDSPTESPTHAKHNKATV
VFPEPSLGTKACLLRYHDRSYIERLLKADTDKDPDDPTHLPSSSTSSPRPAKIARTDPYN
LSHDNPVFPTLASYISHIAAATSTACRLLATDKADWAVCWDGGRHHAKRKEAGGFCYVND
LVLGGLLLSREGRIPIPLKEGEDPKRQRTRAPRIFYLDMDLHYSDGVSAAFHSPTVYPYP
LKESVTPPKPPNVLTLSIHHSSPVFFPPPTPISLLPSPNTGSPFSLSIPLSAYPSRQTYA
KVFNQCIQPIREAWDPDYVILQLGTDGLPGDRVGQYGNWSVDGEGGIKWVVERVKEWGKK
VCVTGGGGYRHDNAARAWAEAMGVLLDRDFEVDTPIPHHDHFEQYAPSFTLQVPASHMRD
ENKPEDLEKAAEVFDVLAKRIKIIVDANS
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggcaccatctacaaggttaacaaatcgccctagacttagagtgtcatacttatggtcg
ccctcccttcaacgtctatccgacgacttgccttcgaatgtcggacgatcaagtatggtg
catgatttgatcaagtcactcaatttacttgatttcgaagagctgaaagagaggttctca
aaaaatgataagggagaagatgaggatggaaagagtgaagatgatgacgataatgaagcg
gacaggatcggagttacgaatgtaggggataaacaaggggctgatggagagcatcaagga
agaacaccggacagcccgactgagtctccaacccacgccaaacataacaaggccacagtc
gtgtttcctgagccaagtctaggtactaaggcatgtctcctacgataccatgatcgctca
tacatagagcgccttctaaaggctgacaccgacaaagatcctgatgatcctacgcacctc
ccttcttcatccacttcatctcctcggcctgccaagatcgctcgcacagatccttataat
ctctcgcacgacaatcctgtatttccaactttagcgtcgtacatctcccatatagcagcc
gctacatcgacagcgtgccgtctgcttgccaccgacaaagctgactgggcggtatgttgg
gatggtggccggcaccatgcgaaaaggaaagaggctggaggattttgttatgtcaatgat
ctcgtcctgggtggcttgttgctctcccgcgaagggcgaataccaataccgttgaaagag
ggggaagatccaaagagacagaggacaagggcaccaaggatattctaccttgatatggac
ctccactactctgatggagtttcagcagccttccactcccctacagtatatccctatccc
ttgaaagaaagcgtaacccctccgaaaccaccaaacgtcctgaccctttccatccaccac
tcatctcccgtcttcttccctcctcctacacccatctctctcctaccctctccaaatacc
ggatctccgttctctctctccatcccactctcagcctacccttcccgccaaacatatgcg
aaagttttcaaccaatgtattcagccgatccgcgaagcttgggatccagattatgtcatt
ctccagctcggcactgatggccttcctggagatagggtggggcagtacggaaactggtct
gttgatggagaaggagggatcaagtgggttgtggagcgggtgaaagagtgggggaagaaa
gtttgtgtgacaggcggaggagggtatagacatgataatgctgctagagcgtgggccgag
gccatgggtgttttgctggatagagactttgaagtggacacgcctattcctcaccatgac
catttcgaacagtacgccccgtcttttactttacaagtgccagccagccatatgagagac
gaaaacaaaccagaagatctggaaaaggcagctgaagtgttcgacgtcctcgccaagagg
attaaaatcatcgtagacgccaattcatag

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