Cryptococcus neoformans var. grubii H99: CNAG_05241
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Entry
CNAG_05241 CDS
T08175
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03018
RNA degradation
cng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CNAG_05241
09123 Folding, sorting and degradation
03018 RNA degradation
CNAG_05241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_05241
03041 Spliceosome [BR:
cng03041
]
CNAG_05241
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CNAG_05241
mRNA degradation factors
5'-3' decay
Lsm complex
CNAG_05241
Spliceosome [BR:
cng03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
CNAG_05241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
23888570
NCBI-ProteinID:
XP_012048552
UniProt:
J9VM47
LinkDB
All DBs
Position
4:814499..815434
Genome browser
AA seq
106 aa
AA seq
DB search
MSSRGGRGGARGGGNQGGERKKRESILNLAQFVDKSIRVKFMGGREATGILKGYDQLMNL
VMDDVVEEYEDGRPTRSLGLVVLRGPNIVLVSPTDGSSEIENPFQQ
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaagaggcggccgaggcggagctcgcggtggtggtaaccaaggaggagaacgc
aagaagcgagaatcaattctcaacttggctcagtttgtggacaagagtatcagagttaag
tttatgggtggacgcgaagctactggtatcttgaaaggctatgaccaacttatgaacttg
gtcatggacgatgtagttgaggagtacgaggatggccgacctacacgaagccttggatta
gtcgttcttcgtggtcccaatattgtccttgtcagcccaacagacggatcatcagaaatc
gaaaaccctttccaacagtaa
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