Cryptococcus neoformans var. grubii H99: CNAG_05388
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Entry
CNAG_05388 CDS
T08175
Name
(RefSeq) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CNAG_05388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cng03400
]
CNAG_05388
Enzymes [BR:
cng01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CNAG_05388
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CNAG_05388
DNA repair and recombination proteins [BR:
cng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CNAG_05388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
Motif
Other DBs
NCBI-GeneID:
23888706
NCBI-ProteinID:
XP_012053585
UniProt:
J9W3N0
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All DBs
Position
14:complement(177022..179623)
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AA seq
472 aa
AA seq
DB search
MPELPEVERARKLIEDSCQGYKIVSVDAQEDSIIFTGGTDHNEFAKEITGRTITGCERKG
KTFWMTLSGEGRYPVMHFGMTGMIQLKGQEPTWYRRKHKESADVWPPRFYKFILKLEPQE
GSIGDEPRELAFIDGRRLGRLRLVSDPVSSHLPVSGLGFDPILNHPTLEEFTKLLVNKKG
TVKGVIMDQAFSAGVGNWVADEVLYQARIHPSCPIPALSEQNIKDLHHQLRAVPLTAISV
NADSKLFPSDWLFRWRWSKGTTQKKQMEKDRKSKGKKAIDSEGGEDVKPEDKEFLELPDG
SPATIKFIEVGGRTTALVEELQKMPDGIEIKPKISKGGKWAGAKRKKAIKEEESDEVNEL
SDQSELEENKRKRPLTARQRATAEKGGINNNLASQTRTEDNKPSAGKRRTIRARIGESKD
HQDSEVKKENGSIRSRKSKKQADEKPARIGSQKGRKKAASTPESSELSDVPE
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgccagagctccctgaggttgaaagagctcggaaacttatcgaagactcctgccaaggg
tacaagatcgtttcagtcgatgctcaagaagacagtatcatctttaccggtggcacagat
cataacgagtttgccaaggagatcacaggaaggactataacagggtgtgagcggaaaggc
aaaacgttctggatgactttgtcgggtgaaggacgatacccggtaatgcacttcggcatg
acaggtatgatacagctcaaaggtcaagaaccaacttggtatcggagaaagcacaaagag
agtgcggacgtttggcctcccagattctataagttcatactgaagcttgaacctcaagaa
ggctccatcggtgacgaacctcgagaactggctttcatagatggacgtcgacttggtcga
cttcgcctggtatctgatcctgtatcttcccatcttcccgtctcggggctaggctttgac
cctatactcaaccacccaactttagaagagtttacaaagctgctggtgaacaagaaaggg
actgtcaaaggagtcatcatggaccaagcattcagtgcgggcgttggcaattgggtcgca
gacgaggtactttaccaggcccgtatccacccttcgtgccccattccggcattatccgaa
caaaacattaaagatctccaccaccaactccgtgccgtccctctcaccgcaatatctgtg
aatgctgattcaaaacttttcccttccgactggcttttccgctggaggtggagtaaaggt
acaactcagaagaagcagatggagaaggacagaaagagtaaagggaagaaggccattgat
agcgaggggggtgaggatgtgaagccggaggataaagagtttttggagcttcccgatgga
tcacccgccacgatcaaatttattgaagtcggtggacgtacgacggcactggtcgaagaa
ctgcaaaagatgccggatgggatcgagatcaagccaaaaatcagcaaaggtggcaaatgg
gccggagcgaagagaaagaaggccatcaaggaggaagagtctgacgaggtcaatgaacta
tccgatcaaagtgaattagaagagaacaaacgcaaaagacctttgacggcaagacagaga
gcaactgcagagaaaggggggatcaacaacaatttagcctcgcagacgagaactgaagat
aataaaccttctgctggaaagcgacgaaccatcagggcaaggattggggagtccaaagat
catcaggattcggaggtgaaaaaggaaaatgggagtataaggtctcgtaaatctaagaag
caagcggacgaaaaacctgcaagaattggatctcaaaagggtagaaagaaggcggcttcg
actccagagtcttcagaattgtctgatgttcccgaatag
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