Cryptococcus neoformans var. grubii H99: CNAG_05428
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Entry
CNAG_05428 CDS
T08175
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CNAG_05428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cng03021
]
CNAG_05428
03036 Chromosome and associated proteins [BR:
cng03036
]
CNAG_05428
Transcription machinery [BR:
cng03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CNAG_05428
Coactivators
SAGA/TFTC/STAGA complex
CNAG_05428
Chromosome and associated proteins [BR:
cng03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
CNAG_05428
STAGA complex
CNAG_05428
TFTC complex
CNAG_05428
SAGA complex
CNAG_05428
SLIK complex
CNAG_05428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
TFIID_NTD2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WD_LRWD1
RMC1_N
Tricorn_2nd
Beta-prop_DCAF12
DUF7165
LisH
Motif
Other DBs
NCBI-GeneID:
23888744
NCBI-ProteinID:
XP_012053602
UniProt:
J9VZH8
LinkDB
All DBs
Position
14:288222..291940
Genome browser
AA seq
837 aa
AA seq
DB search
MSQSPDPSSVKGGAQGQLAPKSSTPAQQPPLTDSKLLRQFVMEYLQSHGFDKALEKLTEQ
VEDANSGVAANAAVLGDADVSKEDADGKATTGEQGGEREAIFRAPGPVPLESNIKRNIPQ
AQAVSASTMSDRITPEFEAQAKYIIEQLQKKVEAVQEEGGDEKEKELRDRAPVDGAMVDV
SEKVAGYEAYRRWVDGGLDVWKAELDNLSFPLFVLLFLDVIHSGFLKTAREFFEKHSAHH
RELHPQDISALSSVSTEEHIKRNPFCARILSEKYVVPLSRNAYDLLLQWLSGASLDDEWE
AGLHSAPGRQKEAIKLIVVSHLNITVSNDSAPLDKVTIASKSGLISSSLPPNINIDAFNT
AAQLKLGPPPMTEKLKEQVTRTLQDEGEAQGANGDANGDIDMISPLPTNESVVKLEPDAE
RDPSVISPDESETLPPIPAVFRIADLKREVEAIKDKRKMIRLGPSGSGASAGSGVLPSVV
TFTLFDHGENANSVEFSRDSSLMAVGSSESCVRLWSLKGDKLKKKGVDIEGNLVEDEGLP
MRKLIGHSGPVYSLSFDPLYGSAGPPSTLLSSSQDGSIRLWSMDTYSNLVVYRGHGKDPV
WDVEWGPMGVYFASASRDRTARLWSSDRVAPLRMYTGHLSDVNCVKFHPNSLYLATASTD
TSCRLWDVQRGACVRLFLGHTDSVTTLSISPDGKTLASAGLDSSIWLWDLGSARPIKKME
GHTGAVTSLSFSAESSVLVSGGLDGTVRCWDVKSAGGERSVDGMFGGADARRGEERGGLP
MNPGDVWDSAPHTPDLLATWPTKRTPILKTHYTPRNLCMVAGSFVPPSNHRTSGGEK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtccccagacccgtcctccgtcaagggtggcgcccaagggcagctagctccc
aaatcatccacacccgcccaacagcctcctctcacagattcaaagcttctccgccagttc
gtcatggaatacttacaatcgcacggtttcgacaaagctctcgaaaagctcactgagcag
gtggaagatgctaattcgggtgtagctgcgaatgcggctgtattgggtgatgcagatgtc
tccaaagaagatgcggatgggaaggcaacgacaggtgaacaaggaggagaaagagaagcc
attttccgagctcccggtcctgtcccgttggaatccaacatcaaacgtaacattccccag
gcccaagctgtttctgcatctacgatgtctgataggatcactcccgaattcgaggctcaa
gcaaaatacattatcgagcagcttcagaaaaaggttgaggcagtccaagaagaggggggg
gatgagaaggagaaggagctgagagatagggcaccggttgatggggcgatggtggatgtc
agtgaaaaagtggctgggtatgaggcttataggagatgggtagatggagggttggatgtt
tggaaggctgaactggataatctgtcgtttccgctttttgtcctcttgtttttggacgtg
atacattctggttttctcaagacagctcgtgaatttttcgaaaagcacagtgcccatcat
cgcgagcttcatccccaggatatttccgcattatcatcagtatcaactgaagaacacata
aagcggaatcctttttgtgctagaatattaagcgaaaaatacgttgttcctttatctcgc
aacgcctatgatttgcttttacaatggctatccggagcgagcttggatgatgaatgggaa
gctggtctccacagtgcccctggcagacaaaaggaggcaatcaagttgatagtggttagc
catttgaacataactgtctccaacgattctgcgcctctcgacaaagtcacaatagcctct
aaatccggtcttatctcatcttccctcccacccaacatcaacattgatgctttcaacact
gccgctcaattgaaactcggtccaccaccaatgacggaaaagctaaaggagcaagttacg
aggactctgcaagatgaaggggaggcacaaggtgccaacggagacgcaaacggcgatatt
gacatgatttcgcccctcccaaccaacgaatctgttgtcaaactcgagcccgacgctgaa
cgtgacccttctgtgatcagccccgacgaatcagaaacgctgccgcctatccctgctgtc
tttcgcatagcagaccttaagcgtgaagtcgaagcgatcaaagataaacgcaagatgatc
cgccttggtccttctggatcaggagcatcagctggatccggcgtcttaccgagtgtggta
acgtttacgctgtttgaccatggtgaaaatgccaactcggtagaattctcgagggatagt
agtttgatggctgttgggagctcggagagttgtgtgaggctttggagcttgaagggagac
aaattgaagaagaagggggtggatatagaagggaatttggtggaagatgaagggctgccg
atgaggaaactaattggccattctgggccagtctattccctttcctttgatcccttgtac
ggctcagctggtccaccttccacgcttttatcctcttcacaagatggatctatccgactt
tggtccatggatacgtactcaaacttggtggtttacagagggcacggtaaagatcctgtt
tgggatgtggaatggggtcctatgggcgtgtactttgcgagcgccagtagggatcggacg
gcgaggttatggagttcagacagggttgcgccgttgagaatgtacactgggcatttatca
gatgtaaattgcgtcaaatttcatcccaattcgctttaccttgccacagcgtccaccgac
acctcttgccgattatgggacgtccaacggggtgcgtgcgtgcgtctcttcctcggacat
accgatagcgtcacaacactctccatttccccggacggcaagaccctagcctcggcaggg
ctggactcgtccatctggctctgggacttgggctccgcccgaccgatcaagaagatggag
ggtcacacaggcgcggtgacaagtcttagtttctcggctgagagttctgttctggtttct
gggggtctggatgggacggtgaggtgttgggatgtgaagagtgcaggaggggagaggagt
gtggatgggatgtttggtggtgcggatgcgaggagaggcgaggagaggggtgggttaccg
atgaatccgggtgatgtttgggatagtgcgcctcatacaccggacctactcgcaacgtgg
ccaacaaaacgaacgcccattctcaaaacacattatacccctcgaaatctgtgtatggta
gccggaagttttgttccgcctagtaaccacaggacgagcggcggggaaaagtag
DBGET
integrated database retrieval system
