KEGG   Cryptococcus neoformans var. grubii H99: CNAG_05797
Entry
CNAG_05797        CDS       T08175                                 
Name
(RefSeq) 5'-3' exoribonuclease 2
  KO
K12619  5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
cng  Cryptococcus neoformans var. grubii H99
Pathway
cng03008  Ribosome biogenesis in eukaryotes
cng03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cng00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CNAG_05797
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CNAG_05797
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cng03021]
    CNAG_05797
   03019 Messenger RNA biogenesis [BR:cng03019]
    CNAG_05797
   03009 Ribosome biogenesis [BR:cng03009]
    CNAG_05797
   03016 Transfer RNA biogenesis [BR:cng03016]
    CNAG_05797
Transcription machinery [BR:cng03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     CNAG_05797
Messenger RNA biogenesis [BR:cng03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     CNAG_05797
Ribosome biogenesis [BR:cng03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    CNAG_05797
Transfer RNA biogenesis [BR:cng03016]
 Eukaryotic type
  tRNA degradation factors
   Rapid tRNA decay (RTD) pathway factors
    CNAG_05797
SSDB
Motif
Pfam: XRN_M XRN_N zf-CCHC Imm5_like
Other DBs
NCBI-GeneID: 23889086
NCBI-ProteinID: XP_012050536
UniProt: J9VRS6
LinkDB
Position
7:complement(902807..906952)
AA seq 1129 aa
MGVPALFRWLSKKYPKIVERVKEDTPKKIRGPDGEIVEEPIRYENPNPNGFEVDNLYLDM
NGIVHPCTHPEGRPAPETEEEMMVEIFKYTERVVNMCRPRKVLMMAIDGVAPRAKMNQQR
SRRFRAAQEAADKEEERKEAIKLFEAMGHAVSEETANHKSWDTNAITPGTPFMDLLSISL
KYWVSHKLTTDPGWKDLKIILSDSSVPGEGEHKIMDWIRRQRSYPTWDANTSHVIYGLDA
DLIMLSLATHEPHFRVLREDVFAQSSKGPPACKNCGKVGHIAANCKSDKKVKDPNVVEVA
KTEDPKPFIFLDVACLREYLAIELVVPGVPFPFDLELAIDDWIFMIFFVGNDFLPHLPSL
EIREGAIDVLLKIWRAELPRMGGYLTNHGKVNLDRAQVILEGLAKSEDEIFQKRKDDEER
QEHSQKRRRLEEHKRQDEDKAREEGRNTLTLNGTEYIAVDNPAATARGGPLHPSLPSRPA
FDLVPKEEAAKQPDDQDQMAKKAMAGSNSDIVKNRKAIRMANMSAAQALKAELEGDNDVN
VDDEKAIAQEGKEEDEAVVTVERTEDEEKEQLTKEEARGTLEEQGEKEGVDEEVVPPAIQ
TDEDEGEAPVGEATMAENDESATPDDDEDPTQVPRKRKRGDSDGDGESNEEDDDDDDDAP
PNPEADQPIPKKKLKVNADGTVDYEDDVKLWEPGYRERYYEKKFGVKLSEREFIDKVTKS
YMEGLCWVLEYYYQGVPAWDWFYPYHYAPFAQDFRDVGSMDIKFETSIPFKPFAQLLGVF
PAASRIHLPEPLQTLMIDEDSPILDFYPPDFEIDMNGKKMAWQGVALLPFIDQNRLLTAL
KSKEELLSDDEKRRNSWGDNVMFIANENPLYDLFCDKLYGLRAKDVNKPIPIDTKASYGI
TGSVLPDPNCVPASTFDTPIPSISECPDLNPNDSISVRYYFPRQAHPHRSILLRGYKPEP
ARLTESDKDWVRRGGQGGRRGHRHNGGGTGNVTGGPGMARGRYESGPPRTNGYQPTPPRS
NYGGNSGYGYGAPAPLPSRPPVSSYGGGASGYGYGNPYAAAPNPYAGGYGAPAPYAAGGY
GQRPYVPPPPPPNPYSAPPPAYGRPPGGGYGYGAPPPRGGGYNPYASRR
NT seq 3390 nt   +upstreamnt  +downstreamnt
atgggtgttccagctcttttccgatggctttctaagaagtaccccaagatcgtcgagcgg
gtgaaagaggacactcccaaaaagatcagaggtccagatggcgaaattgttgaggagcct
ataagatatgaaaatcccaatcctaacgggttcgaggtggataacctttatctggatatg
aatggtatcgtgcatccctgtacgcaccccgaaggccgaccggcaccagagacagaagag
gaaatgatggtggagatcttcaaatatactgaaagggtagtcaacatgtgcaggccgaga
aaagtcttgatgatggctatcgatggtgtcgcccctcgagccaagatgaatcaacagcgt
tctcgtcgtttcagagccgcccaagaagctgcagacaaggaagaggagagaaaagaggct
atcaaattgttcgaagctatgggccacgccgtttcagaagagaccgccaaccacaagagt
tgggacaccaacgcaatcacccctggtacaccattcatggacctcctctcaatatcacta
aagtactgggtgtctcacaagctcacaaccgatcctggatggaaagatctcaaaattatc
ctctctgactcatccgtccctggtgagggtgaacacaagattatggactggattcgtcgt
cagcgaagctaccccacatgggatgccaacacgtcacatgtcatctacggtttggatgct
gatttgattatgctttcgcttgctacccacgaacctcatttccgtgttcttcgagaagac
gtcttcgcccaaagctctaaaggaccacctgcttgcaaaaactgcggcaaagtcggtcat
attgctgccaattgtaagagcgataaaaaggtcaaagatcccaatgtcgttgaagttgcc
aagacggaggaccccaaacccttcatctttcttgatgtggcctgcctgcgcgagtatttg
gcaatcgagcttgttgtaccaggcgtgcccttcccgtttgaccttgaattggcgattgat
gattggattttcatgattttcttcgtcggtaacgattttttgccccatctgccgagtttg
gagattcgtgaaggtgccatagatgtgctgctcaagatctggagggcagagctaccgagg
atgggtggttaccttaccaatcacggtaaggtcaatcttgaccgagctcaagttatcttg
gaaggattggccaagtccgaggatgaaatcttccaaaagagaaaggatgatgaagagcgt
caggagcattcccagaagcgtaggaggcttgaagagcataagcgacaggatgaggataag
gcgcgtgaagaaggacgtaacaccttgactttaaacggcacagaatacatcgctgttgat
aatcccgctgcgaccgctcgtggcggacctcttcacccatcattgccgtctcgaccggca
ttcgacctcgtccccaaggaggaggcagctaaacagccagacgatcaggaccaaatggcg
aaaaaggcaatggctggctccaactcggatatagtcaagaatcgcaaggcgatcaggatg
gcaaatatgagtgcggctcaggcactcaaggctgagttggagggtgataatgatgtgaat
gtcgacgacgaaaaggcgattgcccaagaaggaaaggaagaggatgaagcagttgtgact
gttgagaggacggaggacgaggaaaaggagcagttgacgaaggaggaagccaggggaact
ttggaagagcaaggcgagaaggagggtgtcgatgaagaggtggtcccgcccgctatccaa
acggacgaggatgagggtgaggcgcccgtcggtgaggccaccatggctgagaatgacgaa
tctgctacccccgacgacgatgaagaccccacccaagtcccccgcaagagaaagaggggc
gattccgatggtgatggggagagcaatgaggaggatgacgatgacgacgacgatgctccc
cctaaccccgaagccgaccagcctattccgaagaagaaactcaaggtcaatgcagacgga
acggtcgattatgaagatgatgtcaagctatgggagcccggatatagagaaaggtactac
gagaagaagttcggtgtaaaattgtcagagagagaattcattgacaaggttaccaaatcc
tatatggaaggactctgctgggttcttgaatattattaccagggtgttcctgcatgggat
tggttctatccttatcattatgctccctttgctcaagacttccgcgatgtcgggtctatg
gacattaaattcgagaccagcatacctttcaagccgtttgctcagcttttaggtgttttc
ccggccgctagtcgaattcatctgcctgaacctttacaaactctcatgattgacgaagac
tcccccatcctcgatttttaccctcccgactttgagatcgacatgaacggcaaaaaaatg
gcttggcaaggtgtcgctctcttgccatttatcgaccaaaaccgccttttgactgctttg
aagagtaaggaggagctcctgtctgatgatgagaagaggaggaacagttggggagacaat
gttatgttcatcgccaatgagaacccgttgtatgatttattctgtgataaattgtatggt
ttaagggcgaaggacgtgaacaagcctataccaattgacaccaaagcttcgtacggaata
actggttctgttctacccgatcccaattgtgttcctgcgtccacattcgacacgcctatt
cccagcatttccgaatgccctgatcttaaccccaacgactctatctccgtccgatattac
ttccctcgccaagcgcatcctcatcgatcgatccttctgcgaggatataaacctgagcct
gcgaggctgacagaaagcgataaggattgggttcgacgcggcggtcaaggtggaagaaga
ggtcacaggcacaacggcggtggaaccggaaatgtgacaggcggacccggtatggcgagg
ggaaggtacgagagtgggccgccacggaccaatggctaccaacctactccgcctcgctcg
aactatgggggtaattcaggctacggatacggtgcccctgcacctctaccatcaagaccg
cctgtatcgtcttacggaggtggagccagcggatatggctacggtaacccctatgctgca
gcgccaaatccttatgccggaggttatggagcacccgcaccttatgctgcaggcggctat
ggtcagcgtccctacgtaccaccaccgcctccgcctaacccatactctgccccaccacca
gcttatggcagaccacctggcggaggatatggttatggtgctcctccgccaaggggcggc
ggttacaatccttatgcctccaggaggtag

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