Cryptococcus neoformans var. grubii H99: CNAG_05811
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Entry
CNAG_05811 CDS
T08175
Name
(RefSeq) hypothetical protein
KO
K12589
exosome complex component RRP42
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNAG_05811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_05811
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CNAG_05811
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
CNAG_05811
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
23889100
NCBI-ProteinID:
XP_012050548
UniProt:
J9VWP4
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All DBs
Position
7:934372..935578
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AA seq
332 aa
AA seq
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MSVPVPTLSPAESSYIVTSLAHPSNPTRTDARPLFASRPIQISYGVFPQANGSAQVKLGG
TEVVSGVKLEAIDVVGQQIQGQEKWRTKVEVDVTPQAFPNISTPSLVALSTHLTSIVTSH
FIPSIPALPILPNKKYFQPHLHLTILSSSGNIPSALILAARSAFADLKVPKTKVISWAGE
SGEDANGGVDVGRGDMSGIKAAIATTKGKGKGKMIARGSEDWDLDMEDGEGVKFLEGREA
LPVLVTLNMVPNSPNIFLDATPQEESACPTHIHLFLKASSPHDLSKPKLCGLRLEGPDGL
DAGRVRGLLEQGASVASELIKEVNRTIPSLDI
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcccagtcccaactctctccccggccgagtcatcgtacatcgtcacttctctg
gctcatccttcaaatcccacaaggaccgatgcccggcctctcttcgcttctaggcccatt
caaatttcctacggcgtatttccacaagcaaatggtagcgcgcaagtaaagttaggagga
accgaggtggtctctggtgtaaagctggaagctatcgacgtcgttggacagcagatccaa
ggtcaggaaaagtggagaacaaaggtcgaagttgatgtaacaccgcaagcatttcccaac
atttctaccccatcactggttgccctttccacccatttaacttccatcgtcacgtcccat
ttcatcccctccatcccagcccttcccattcttcccaacaagaaatactttcagccccat
ctccatcttaccatcctctcctcctctggcaacatcccttccgccctcatcctcgctgct
cgttcagcttttgctgacctcaaagttcccaaaaccaaggtcatctcttgggccggcgag
tctggagaagatgccaatggtggagttgacgttggaaggggagacatgagcggtatcaag
gctgctatcgccactaccaaaggaaaggggaaagggaagatgattgccaggggatctgaa
gactgggatctggatatggaagatggggaaggtgttaagtttttggaggggagagaagcg
ttacctgtgcttgtgacattgaacatggtgcctaattctcctaacattttcctggatgct
acacctcaagaagaatctgcctgtcctacccatatccatcttttcttaaaggcatcgagt
ccccacgacctttcaaagcccaaactttgtggtctgcgattagaaggtcctgacggtctg
gatgctggtcgtgtcagagggttgttagagcagggcgcgagtgtcgcgagcgagttgatc
aaagaagttaacagaactataccaagtctagacatctaa
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