KEGG   Cryptococcus neoformans var. grubii H99: CNAG_05811
Entry
CNAG_05811        CDS       T08175                                 
Name
(RefSeq) hypothetical protein
  KO
K12589  exosome complex component RRP42
Organism
cng  Cryptococcus neoformans var. grubii H99
Pathway
cng03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cng00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CNAG_05811
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cng03019]
    CNAG_05811
Messenger RNA biogenesis [BR:cng03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     CNAG_05811
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     CNAG_05811
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 23889100
NCBI-ProteinID: XP_012050548
UniProt: J9VWP4
LinkDB
Position
7:934372..935578
AA seq 332 aa
MSVPVPTLSPAESSYIVTSLAHPSNPTRTDARPLFASRPIQISYGVFPQANGSAQVKLGG
TEVVSGVKLEAIDVVGQQIQGQEKWRTKVEVDVTPQAFPNISTPSLVALSTHLTSIVTSH
FIPSIPALPILPNKKYFQPHLHLTILSSSGNIPSALILAARSAFADLKVPKTKVISWAGE
SGEDANGGVDVGRGDMSGIKAAIATTKGKGKGKMIARGSEDWDLDMEDGEGVKFLEGREA
LPVLVTLNMVPNSPNIFLDATPQEESACPTHIHLFLKASSPHDLSKPKLCGLRLEGPDGL
DAGRVRGLLEQGASVASELIKEVNRTIPSLDI
NT seq 999 nt   +upstreamnt  +downstreamnt
atgtctgtcccagtcccaactctctccccggccgagtcatcgtacatcgtcacttctctg
gctcatccttcaaatcccacaaggaccgatgcccggcctctcttcgcttctaggcccatt
caaatttcctacggcgtatttccacaagcaaatggtagcgcgcaagtaaagttaggagga
accgaggtggtctctggtgtaaagctggaagctatcgacgtcgttggacagcagatccaa
ggtcaggaaaagtggagaacaaaggtcgaagttgatgtaacaccgcaagcatttcccaac
atttctaccccatcactggttgccctttccacccatttaacttccatcgtcacgtcccat
ttcatcccctccatcccagcccttcccattcttcccaacaagaaatactttcagccccat
ctccatcttaccatcctctcctcctctggcaacatcccttccgccctcatcctcgctgct
cgttcagcttttgctgacctcaaagttcccaaaaccaaggtcatctcttgggccggcgag
tctggagaagatgccaatggtggagttgacgttggaaggggagacatgagcggtatcaag
gctgctatcgccactaccaaaggaaaggggaaagggaagatgattgccaggggatctgaa
gactgggatctggatatggaagatggggaaggtgttaagtttttggaggggagagaagcg
ttacctgtgcttgtgacattgaacatggtgcctaattctcctaacattttcctggatgct
acacctcaagaagaatctgcctgtcctacccatatccatcttttcttaaaggcatcgagt
ccccacgacctttcaaagcccaaactttgtggtctgcgattagaaggtcctgacggtctg
gatgctggtcgtgtcagagggttgttagagcagggcgcgagtgtcgcgagcgagttgatc
aaagaagttaacagaactataccaagtctagacatctaa

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