Cryptococcus neoformans var. grubii H99: CNAG_05829
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Entry
CNAG_05829 CDS
T08175
Name
(RefSeq) hypothetical protein
KO
K14327
regulator of nonsense transcripts 2
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03013
Nucleocytoplasmic transport
cng03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNAG_05829
03015 mRNA surveillance pathway
CNAG_05829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_05829
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CNAG_05829
mRNA cycle factors
P-body specific factors
CNAG_05829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
LPD38
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
23889118
NCBI-ProteinID:
XP_012050383
UniProt:
J9VPG7
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All DBs
Position
7:979283..984067
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AA seq
1127 aa
AA seq
DB search
MSSTADYVAKYRRRAALLHTAEKYWLDDARRPPGSLDSSLKKHTTLINKLKSSLLIGPAD
ALIKDIDGLTLTKYLDEIVAAVVEGAAKKGDPEVAVDVIIHLHSRLTPDFLPQLLQPLLA
VLSANAAATGPIGKDGDKDKEKEDKERLSKQRPVLRIVAELAMVGAWAEGVVKGAAEVGK
VLKGLMTGDPQYSNLPLITTFLKYFGRAYLGDNPVLSKAADGAKEDEVETLPENVTELVP
PEIQKQMWQLFVNYFNTASKTLVKGQLKLLEQDKRNHEAYIKSGEIFEDRQQAYEKMTRA
VERLTTGVQTLADLLNLTPPTLPTAASLSKSGLQIVESTSSFTVRDDGPIAGGIWDDEEE
QKFYQDLIDLKEVVPASLLGIREKSKEEDHEGSGSQREEEKEEEEAARKADEEALRKQLE
QMELADSQAQPEPDLEPEPEPESEHQPQPHTLQRTASSSSLVSVTHEEAQAEIKDEQAAP
LSMTTTTAIEEDGLQSGPAARLSALFAALPESNNREVVDKLAVEFAFLNSKAARKRLIKF
IGEVPKQRTDLLPHYARLIATLNPYMPDVGAGILDILDEELRYLQRKKLVRELDSTRLKN
VRFYGELAKFKVAKPFNILHVLKVFLDDFKFNIENISNLLETCGRFLLRYEGTAEVAKRM
VELMRKKQANMHLDQRHQLMLENAFYMCNPPERVVREVVQLTPMQSFIRHLLDEVLMKRT
RDKVLKLLRKLHWEDPEVYGFILSAFTNVWEVKFGNIPQLADLVFDLQRWHPEFGIAVVD
QVLENIRIDMEENIFKFNQRRIATMKYVGELYMYRVINASVIFEILWSLLSFGHVEPMPF
PGRESPIDAVDDFFRVRLACTLLDTCGVCFPKGSQGRKLEQYLIMLQLYITCKTELPMDV
DFMLTDTLDLLRPKMPKLRTFAQAAAAVDELMATVGDMGGEDSASEDEEERQSPEDKPDE
PEPVVENMQSVEDEDEDVVLIRDTSKNDELDAEERAAFDREFAKVLADTTDTRREQRKAA
PPIFDTAVPVVKKRIEEPKAKASNGIGEEEGRMQFMLMSKKAGKQQLRTLAIPVDSTIAL
NTRTQQAQSKAEQEQLKRLVLQNERRLERSEMEGIETRGVKLRFAHS
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccacggccgactacgtcgcaaagtatcgcaggagagcagcgctcctccacaca
gcggaaaagtactggctcgacgatgccaggcgtccgcccggcagcctcgattcgtctctc
aaaaagcatacaacactcataaacaaactcaaatcctcactcctgatcggccccgccgac
gcactgatcaaagatatcgacggcttgacactgacaaaatatctggacgaaatcgttgct
gcagtcgtcgaaggtgcggcaaagaagggcgaccctgaggttgctgtggatgtaatcatc
catctccattcacggcttacccccgactttcttcctcaacttctccagcctctcctggct
gtcttatccgcgaatgcggctgccaccggacctataggcaaagatggagataaagacaaa
gaaaaggaggataaagagaggttatcaaagcagagacctgttttgaggatcgtagcagag
ttggcaatggtcggtgcttgggctgaaggagtcgtcaagggcgccgcggaggttggtaaa
gtgctcaagggattgatgaccggcgatccccaatacagtaatctcccattaatcaccaca
ttcctcaaatactttggccgcgcctacttgggcgacaaccccgtcctgagcaaagcggct
gatggtgcaaaggaagacgaggtggagacgcttcccgaaaatgtgaccgaactcgttcct
ccagaaattcaaaagcaaatgtggcagctattcgtcaattacttcaacactgctagcaaa
accttggtcaagggacagctcaaacttctcgagcaggataaacgcaaccatgaggcttac
atcaaatcgggagaaatctttgaagatcgtcaacaggcatatgaaaaaatgacccgtgcc
gtcgaaagactcacgactggcgtccagaccctcgcagacctcttaaacctgactcctccc
accttgccaaccgctgcatcactctccaaatctggtcttcaaatagtagaatccacttcc
tcattcacagtccgtgatgatggtcccatcgcaggcggtatatgggacgatgaagaggaa
caaaagttttaccaagatttaatcgatctgaaagaggtcgtcccagcttccttgctcggc
atcagggaaaaatcaaaagaagaagatcacgaagggagtggatcccaacgtgaagaggag
aaggaggaggaggaagctgctcgcaaggcagacgaagaagctctccgcaaacagctcgaa
caaatggagctggccgattctcaagcccagcccgaacccgatctcgaacccgaacccgaa
cccgaatccgaacatcaacctcaacctcacactctgcaacgcaccgcgtcctcttcctcc
ttggtctctgtgacccacgaagaggctcaggccgagatcaaagacgagcaggctgcgcca
ctgagtatgaccaccaccaccgccatcgaagaggacggtctgcaatctggtcccgcagcg
aggctatcggccctctttgcagcgttgccggaatcgaacaatagggaggtggtggataag
ttggctgtagaatttgcgtttttgaattccaaagcggcaaggaagaggctcatcaagttc
attggtgaagtgccaaaacaaaggaccgacttgttgcctcattacgctaggcttattgcc
acgctgaatccttatatgccagatgttggcgcaggtatccttgatatcctggatgaagaa
ttgagatatttgcaaaggaagaaacttgtccgggaattggatagcacacgtctcaagaac
gtcaggttctatggcgaattggccaaattcaaagtcgctaaacctttcaacattcttcat
gtcctcaaagtctttttggatgactttaaattcaatatcgaaaacatctcaaacctgttg
gagacttgcggaaggtttttgctgcgctacgaaggaacagcagaagtggccaagcggatg
gtagagttgatgaggaagaagcaagcgaatatgcatcttgaccagagacatcagcttatg
ctggagaatgccttttacatgtgcaacccacctgaaagagttgtcagagaagtagtacaa
ctcactcctatgcagagcttcatccggcacctccttgatgaagtgttgatgaaacgaacg
cgcgacaaggtgttaaaactgctgagaaagttgcattgggaagatccagaggtctacggc
tttatcctctctgcctttacaaatgtttgggaggtcaagtttggtaatattcctcaactc
gcagatctcgtctttgatcttcaacgatggcatcctgaattcggtatcgcggtcgttgac
caggtcctggaaaatattcgcattgacatggaggaaaacatcttcaagttcaaccagagg
agaatcgctacaatgaagtacgtaggagagctgtatatgtacagggtcatcaacgcttcc
gtcatttttgaaattctttggtcccttttgtcttttgggcatgtcgagcctatgccgttc
ccaggccgagaaagccctattgacgccgtagatgactttttccgggtccgtctggcttgc
acattactcgatacctgtggcgtatgtttcccaaaaggttctcaaggacgcaaattggaa
caatacctcatcatgcttcaactctacatcacatgcaaaaccgagctgccaatggatgtt
gactttatgctcacggatacccttgaccttttgcggccaaaaatgcccaagctaagaacg
tttgcgcaagcagcagcagctgttgatgaattgatggctacggtaggcgatatgggtggg
gaagatagtgcatcagaggatgaagaggagcgtcaatcacctgaagacaagcctgacgag
ccggaacctgtcgtcgaaaacatgcagtcagtggaagatgaagatgaggatgtcgttctc
atccgcgatacctccaaaaatgacgagctcgatgccgaagaacgagctgcatttgaccga
gagtttgcgaaagtattggcagatactaccgataccaggcgagaacagagaaaggctgcg
ccaccgatctttgatactgctgtgcctgttgtcaagaagaggattgaagaacccaaggca
aaagcgagtaacggaatcggagaggaggaaggaagaatgcagttcatgttgatgtccaag
aaggcaggaaagcagcagctgcgaacgttggcgatccctgtagattccaccattgcgtta
aacaccaggactcagcaagctcagagcaaagccgagcaagagcagctcaagagattggtg
ttgcagaatgaaagaaggttggaaagatcagaaatggaaggcattgagacaagaggtgtg
aagctccgttttgcgcattcatga
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