Cryptococcus neoformans var. grubii H99: CNAG_06004
Help
Entry
CNAG_06004 CDS
T08175
Name
(RefSeq) transcription initiation factor TFIIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03022
Basal transcription factors
cng03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CNAG_06004
09124 Replication and repair
03420 Nucleotide excision repair
CNAG_06004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cng03021
]
CNAG_06004
03400 DNA repair and recombination proteins [BR:
cng03400
]
CNAG_06004
Transcription machinery [BR:
cng03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CNAG_06004
DNA repair and recombination proteins [BR:
cng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CNAG_06004
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
23889263
NCBI-ProteinID:
XP_012052963
UniProt:
J9VUU2
LinkDB
All DBs
Position
12
Genome browser
AA seq
428 aa
AA seq
DB search
MPSPPSTLIVILDTHPLAWHLLSRLPPAPPLPDNKIVNNATSSPTSLDQFMTILIVFLNA
HLASKWGNEVVVYTASAGKAELIYPLSNEKIRQRGEGAKPNANMYRPFQVLDERIEEGLK
EVVREEERKLNTEGPAFINEPPAMVSALTKALCFINRRISPSVPTDPTALPPSSDPNNNT
SDNSGGLLPSKEVRILVINATPGAAVGGRADPDGDSEGSHGTEKENGDANEEERKSQRRQ
QRMRGGYVGLMNCVFAAQKAKVPIDILSLPPSTIDSSPPVFLQQAAHLTDGVYWQWNGRG
GLLQYLHSIYLTPPSLRHNPFVTPPQDAVNFRAVCFCHHRTLDVGFVCSVCLSIFCEPKP
ICAMCKTRFPIKSIPRLRTLAGLNTRIQVPDTVVKPPAPKSSSTNATGGRAGVIGWKGDN
RGEPIVID
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgcccccctccacgctcatcgtcatcctcgacacccaccccctcgcgtggcat
ctcctctcccgtctccccccagcccccccgcttcccgacaacaagatcgtcaacaatgcc
acatcatcccctacgtctctcgaccagttcatgaccatcctcatcgtctttctcaacgcc
catctcgcaagcaaatggggtaatgaagtcgtcgtctataccgcatctgccggaaaagcc
gagctgatatacccgctttcaaatgagaagatacggcaaaggggagaaggagcaaagccg
aatgcgaacatgtacagaccgttccaggttttggatgagaggattgaagaagggctaaaa
gaagttgtgagggaggaagagcgaaaattgaatacggaaggtccggcgtttataaacgaa
cctcccgccatggtttcagcgctcactaaggctctgtgcttcatcaatcggcggatatca
ccttcggtccctacagatccaacagctttgccaccgtcttcagacccaaataacaacacc
tcagataattctggcggccttttaccaagcaaagaagtgcggatattagttataaacgct
actccaggagctgccgtgggaggccgagcggatcctgatggtgattcagaaggaagccat
ggaacggagaaagaaaatggggatgcaaatgaagaagaacgaaaaagtcagaggcggcaa
caacgcatgcgcggtggttatgtcggactgatgaactgtgtctttgccgctcaaaaagct
aaagtcccgatagatatcctttcccttcctccatctacgatcgattcttcccctcccgtc
ttcctgcaacaagccgctcatctgacggacggagtgtactggcaatggaatggaagaggc
ggtttgctccagtatcttcacagtatatacctcacaccaccttctctccgacataacccg
ttcgtcaccccgccacaagatgctgtcaacttccgtgcagtgtgtttttgtcatcataga
acgttggacgtgggtttcgtatgtagtgtctgtctctccatcttctgcgaaccaaaaccc
atctgcgcaatgtgtaaaacccggtttcctatcaagtctatccctagactccggacgctg
gccgggttgaatactaggatccaagtgccggatacggttgtgaaacccccggcaccaaaa
tcgagcagcacaaacgccacaggaggaagggccggggttatcggctggaagggagataat
aggggtgaaccaatcgtgattgattag
DBGET
integrated database retrieval system
