Cryptococcus neoformans var. grubii H99: CNAG_06103
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Entry
CNAG_06103 CDS
T08175
Name
(RefSeq) RNA binding protein
KO
K27407
RNA-binding protein VTS1
Organism
cng
Cryptococcus neoformans var. grubii H99
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_06103
04131 Membrane trafficking [BR:
cng04131
]
CNAG_06103
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
CNAG_06103
Membrane trafficking [BR:
cng04131
]
SNARE
SNARE associated proteins
Others
CNAG_06103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
TFIIA
Motif
Other DBs
NCBI-GeneID:
23889341
NCBI-ProteinID:
XP_012053135
UniProt:
J9VVN9
LinkDB
All DBs
Position
12:complement(312425..316651)
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AA seq
687 aa
AA seq
DB search
MASHTLRPHRSPSPSPEPPVNLANPAKLTRQSLGPPTSGNSKGFGSLGLGPGLASPSSPS
QPRHVSSSVAMGMGNRDSLSPRPSGVGSGRAVSATTGPRPSSEFIPTREAKTPEAEQIDQ
WFKHLANWEATLEEMAAASTDQNFTEELGAIEQWFRVLSEAERTAALYSLLQYSTPVQIR
FFISVLHHMSQSDPMSALLSPSLSGSNAFQTQVESKLSNMNLKSPSAGGGAGFAGSSGNG
HYLAPDDAAAKAAKARQNRISAPGTLQPHDRWQGQLDQVVERGTSPGLESNMSGRSRSKS
PTPEPRPKSTDFSGKPRESLRRESAAFPRSPRVSAGSPGIGLGIGHESPMASPFGNNASW
ASMVNTPLVQNFNDGKLVAPASVADLSQALNMATLQLNNPGYLPLDDARKYRRPTGGLAS
GQTSRNVSGQYNDDGEIVNPHTTQPGTPSGLLPNQFGGGRSPLVDQFGLGGLGIGADSTT
LANLGLNYNLAGLGGVNPGLNGLTAAQAQAAQMLAMQQQLQNSQYSPFNASAPSLQPGLN
PSRRGAGRGQSSHLNQHYNQHQQQHQPGRRSPNPLKSHSPAPGQQTGGGGAGGGAGVAGP
EDVDVKVLEDVPNWLRVLRLHKYTPNFEKSNWNDMVLMTDQDLQDNGISAQGARTKFLKV
FYNVRTKMDIAHPPGQEEYAPGPKESK
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccacactctccgacctcaccgttccccctctccctctcccgaacctcctgtt
aaccttgctaacccggccaaactcacccgccaatctcttggtcctcccacatccggtaac
tccaaaggttttggatccctcggcttgggccctggacttgcatctcctagctcccctagc
caacccagacacgtgagctcgtctgttgctatgggtatgggaaacagggacagcttgagc
ccaaggccaagcggggttggcagtggaagggccgtttccgccactactggccctaggccg
agcagtgaattcattcccacccgcgaggccaagactcccgaagcggagcaaattgatcag
tggtttaaacatcttgctaactgggaagcgacccttgaagaaatggctgctgcgagtact
gaccaaaactttaccgaagagcttggcgcgattgagcaatggttccgcgttctctccgag
gctgagcgtactgccgctctatactctcttcttcaatattccactccggtccagatccgt
ttcttcatttcggtgcttcaccacatgtcccaatctgaccccatgtctgctctcctctct
cccagcctttccggtagcaacgcgtttcagactcaggtcgagtccaagctgtccaatatg
aacctcaagtccccctccgcaggcggcggggccggtttcgctggctcttctggtaatgga
cattatctcgctccagatgatgctgcagcaaaggccgcgaaagcaagacagaaccgtatc
tccgctcctggtacactccagccccacgacaggtggcaaggtcagctcgatcaggtggtc
gaacggggtacatctccaggtttggagagtaacatgtctggccgtagcagaagcaagtcg
cccactcctgaaccccgacccaagtctacggacttttcgggtaaacctcgagaatccctc
cgccgtgaaagcgctgccttccctcgctctcctcgagtttctgctggcagccctggtatt
ggcttgggtatcggacatgagtcccctatggccagtccatttgggaacaacgccagctgg
gcgagcatggtcaacacccctctcgtacagaatttcaatgacggcaagctcgtcgctcct
gctagcgtcgccgacctctcccaggctctcaacatggcgaccctccagctcaataaccct
ggctaccttcctcttgacgatgctcgcaagtatcgacgacccactggcggtctcgcttcc
ggtcagacgtctcgtaacgtctcagggcaatacaacgacgacggtgagattgtcaatccg
cacactacccagcctggtacaccctctggccttcttcctaaccaatttggagggggacgt
tcgcctcttgttgatcagtttggtttgggcggcttgggtatcggtgccgattccacaacg
ttggctaatctcggactgaactacaaccttgcaggactcggaggtgtgaaccctggttta
aacggtttgaccgccgcgcaagcccaagcggcgcagatgctcgctatgcagcaacaactc
cagaactcccaatactcgccgttcaacgcctccgcgcctagccttcagccggggttgaat
ccctctcgacgtggcgctggtcgaggccagtcttcgcaccttaaccaacactacaaccaa
catcaacagcaacaccagcctggaaggcgaagtcccaatcctttgaagtcccactccccc
gcgcctggtcaacagactggcggtggaggtgctggtggtggcgccggtgtggcaggaccg
gaagatgtggatgtgaaggttttggaggatgtgcccaactggctgagagttctcaggttg
cataaatatacgcctaactttgaaaagtccaactggaatgacatggtgttgatgacagat
caggatttgcaggacaatggtatctcggctcaaggtgcgaggactaagttcctcaaggta
ttctacaacgtccgaaccaagatggacattgcacaccctccagggcaggaagagtacgct
cccggacccaaagaatccaaataa
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