Cryptococcus neoformans var. grubii H99: CNAG_06131
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Entry
CNAG_06131 CDS
T08175
Name
(RefSeq) hypothetical protein
KO
K26109
nuclear exosome regulator NRDE2
Organism
cng
Cryptococcus neoformans var. grubii H99
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_06131
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
CNAG_06131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
Motif
Other DBs
NCBI-GeneID:
23889366
NCBI-ProteinID:
XP_012053014
UniProt:
J9VY65
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All DBs
Position
12:386117..390710
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AA seq
1257 aa
AA seq
DB search
MASPPSFSSFPDLPVEKLGKVEAGPSQNPAPSFSSFPELEPQARKRRSRSRSKGQVRDDD
DQRRQKMGRERTGDKERDRDSRKRKEKDEVRVRDERQGEKDREARQSGERKHEGDRKGRR
RNREEDEGRRYGEKKKRKDERDHSAERRYKEERRERERKQAEALIRGDVRISQPTVAAEK
PTWKEDGWVKEEDGVPWYETLGKTSKKKRYEDFDDPNSSSTFFVDIAGDRDILRYGGSSS
FSAPKYHRDGGNRIIGYNDGLRIAYSRDRTEKGIEVAPKGRPYVPRYNKQTKSAIGHLER
ILLRPSPHGEIDSHANFLAFEVRSRQEESDVPKYRSITRSAEEDKGDQLSVLHSIIGDFT
TMEQEVRKRTSWMEQHLRDYPSDVERWIEYSRLHLKLSPNAERATGIADPAKLPTTKAQA
EITLSILSRALKATPENAYSERLHLAYLRAAETVWSADKVTSRWKNVLRGLGEQSGKIRG
LEEGMMEMWLGYIEWREGQGFGRGDGEKGKGESIDEVVDVYLECIDRLKNKTGNGGNLQA
REENLVYLFLRACLFLKQSGHGERALSAFQALMEITFFRPDHLRYSPPADQLTAWYQALI
GEFETFWDTEAPRIGEPGSVGWRHTPAGTAPPPSRPAPSFAHTSFDPFERWFEAEISAEK
AYALPGRVRDLDPAIEDDPFHVIVFSDISPFLFPIFTPEVRLQLIYAFLTFLGLPFTPPE
VPSASPANADPHLCWALVENRSARQAFWPPKQGTKKIAWQTVGGEPMEPERMRGMDDPFG
CPVKCWAQNRETMFGRKGIWYRDVGALDLQAIDVELVRSVFELLRPLVPDPSFTLASFAL
EAAISPKGAVKAAKAILASERSNLLLWDGYARIERQRGNISASRTVYATALQAARQERGD
KPRSEDEMDLWAGWAEVEFEADERERCLEVLIMAAGIGSERLVEHINPTYTPTAPSPINV
LKSRQYYHSDLTPLSPSHLLLIALFNYLLDGIDSARDLLLHSSQTYPSSSAGSEESLQLL
TKILYHHTTRHPTPPALTRDILEYALSSFPNNTSFLSLYMYGELGGRVYGRVQRLIAEIT
SEHKDGGPMKGIVGHLWAVWAEAVSAHRTFWDDGGGGAERVRMALDKGINSTSGRYSAAL
WMLYIEFEALMGRHQTAKQLCYRAVSMLGGCKALYLLPFSLPLRSHFSTHELKGWAELMV
ERGLRLRIPFELFWTTEEVEENEVSRTPLPLRTEPKGGLLGPNEICGRRRSNEFYED
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaccgccctctttctcatcgttcccagacctcccagttgagaaactgggaaaa
gtggaggcaggtccgtcgcaaaaccctgcaccgagcttctcttcgtttccggaactggaa
cctcaggctagaaaacgacgatctcgatctcggtcaaaaggacaggtacgtgacgatgac
gatcaacgaaggcaaaagatgggtagagaaaggacgggcgataaggaaagagacagagat
agccgcaagaggaaggagaaagatgaagtgagggttcgagatgaaaggcagggtgagaaa
gaccgcgaagcacgacaaagcggggagagaaagcacgaaggagatcgtaaggggcgaaga
agaaatagagaggaagatgaaggacgccggtatggtgagaaaaagaaacgtaaggatgaa
agggatcactcagcagaaaggagatacaaggaggagcgacgagagcgtgaacggaaacag
gctgaagcactcattcgtggcgacgtaaggatttcgcaacctacagtggctgctgaaaag
ccaacttggaaggaagatgggtgggttaaggaagaagatggggtgccttggtatgagaca
ctgggaaagacaagcaagaagaagcgatatgaagatttcgacgatccaaattcttccagc
acgttttttgtggatattgcgggagacagggatatcttgcgctacggaggcagctcatcc
ttctcagctcccaagtatcaccgtgacggagggaaccgtatcattggttacaatgacggt
cttcgaatagcttactccagagatcggactgaaaaaggtatcgaagttgcgccaaaagga
cgaccatacgttccacggtacaacaagcaaaccaagtctgcaatcggtcatcttgagcgt
attctcctccgaccgtctccgcacggtgaaatagactctcatgccaactttcttgccttt
gaggttcgtagccggcaagaggaatctgacgttcccaaatatcgcagtatcacacgctct
gccgaggaagacaaaggtgatcagctttctgttctgcactctatcattggcgatttcaca
accatggagcaagaagttcggaaacgcacgtcctggatggagcaacatttgcgagattac
ccttcagatgtggaacggtggatagaatactcgagactacatctgaaactctctccaaac
gcagagagagcaacaggcatcgccgaccccgcgaagttgcccacaaccaaagcccaagct
gaaatcaccctttcaattctctctcgagcccttaaagcaacaccagagaacgcttattcc
gagcgattacatcttgcatacctccgagcagcagagactgtctggtcagctgataaggtc
acatcgagatggaagaatgtcttgagggggttgggcgagcaaagtggaaagatacgaggg
cttgaagagggtatgatggaaatgtggcttggttatattgaatggcgagagggtcaaggg
tttgggcgaggagacggagaaaagggtaagggggagagtattgacgaggttgtggatgtt
tacctggagtgcatcgacaggttgaagaacaaaactgggaatggtggcaatttgcaagca
cgggaagagaatctggtgtacttattcctacgagcatgtcttttcttgaagcaatcaggc
cacggtgaacgtgcattgtccgctttccaagctctcatggaaataactttcttcagaccc
gatcatctgcgatacagccctccagcagaccagctcacagcatggtaccaagccctcatc
ggcgagtttgagactttctgggacaccgaagcccctcgtatcggagaacctggctctgta
ggctggcggcatacaccagccggtactgctccccctccttctcgtcctgcgccttctttc
gctcacacttctttcgacccctttgagcgttggttcgaagctgaaatttctgctgagaaa
gcttacgctctccctggtcgagtacgagatttggaccctgctattgaagatgatcctttc
catgtcattgtcttttctgatatatcgcctttcctttttcccatcttcacgccggaagta
cgtcttcaattgatttacgcattcctcacatttctcggtcttccttttaccccgccagag
gtccctagtgcttcgcctgcaaatgccgacccccacttatgctgggcgctggtcgagaat
cggtccgcaaggcaagccttttggccacccaaacaaggtaccaagaagattgcgtggcag
actgttggtggagagcctatggaaccagagaggatgaggggaatggatgacccttttgga
tgtccggtcaagtgctgggctcaaaatcgagagacgatgtttggaaggaagggaatctgg
tacagggacgtgggagctttggatttgcaagcgatcgacgtcgagctggttaggagcgta
tttgaactactgaggcccttagtgccagatccatccttcacactggcgtcattcgcgcta
gaggccgccatttctcctaaaggtgctgtcaaagccgctaaagcaatcctcgcttcagaa
cgatcaaatctattactgtgggacggctatgcacgtatagagcgtcagcgtggcaacatc
tcggcctctcgtacggtatatgccacggcacttcaagctgctcgtcaagaacgaggagac
aaaccgcgctcggaagatgagatggacctttgggctggatgggcggaagtcgagtttgaa
gccgacgagcgcgagaggtgcctggaagtgttgatcatggccgctgggattggcagtgag
agattagtggaacacattaacccgacatataccccaacagcaccttcacctattaacgta
ctcaagtcaagacaatactaccattcagatttaacaccgttatcacccagtcatcttctc
ctcatcgcccttttcaactacctcttagacggtattgactctgcccgtgacctcctcctg
cactcatcccaaacctatccatcttcgagcgctggatctgaagaatctcttcagttgctg
accaagatcctctatcatcacaccaccaggcatcccacaccaccggctcttacccgagac
atattagaatacgccctgtcctcattcccgaataacacctccttcctgtctctgtacatg
tatggcgagctaggaggcagggtctacggcagagtacaacggctgattgccgagatcacc
agtgaacataaagatggagggccgatgaagggcatcgtgggtcatctgtgggcagtgtgg
gctgaggctgtttcagcacataggacattctgggatgacggtggcggaggtgctgaaagg
gtaaggatggcgctggataaaggaatcaactcgacgagtggaagatactctgccgcgctg
tggatgctctacatcgagtttgaagcgcttatggggcggcatcagacggccaagcagctc
tgctaccgtgcagtgtctatgttgggtggatgtaaagcactctatcttttgccattttcc
ctccccctcagatcgcacttctcgacacatgagctgaaaggatgggcggagctcatggtt
gagcgtggtcttcggctgcgaataccatttgagctgttctggacgacggaagaagtggaa
gaaaatgaagtttccaggacaccccttcctttaagaacagagccgaaaggaggtctccta
ggtccgaatgaaatttgtggacggaggagatcaaacgagttttacgaggattga
DBGET
integrated database retrieval system