Cryptococcus neoformans var. grubii H99: CNAG_06277
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Entry
CNAG_06277 CDS
T08175
Name
(RefSeq) ribosomal RNA-processing protein 12
KO
K14794
ribosomal RNA-processing protein 12
Organism
cng
Cryptococcus neoformans var. grubii H99
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cng03009
]
CNAG_06277
Ribosome biogenesis [BR:
cng03009
]
Eukaryotic type
90S particles
Other 90S particles
CNAG_06277
Pre-60S particles
Other pre-60S particles
CNAG_06277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
MMS19_C
TOR1L1_N
Dopey_N
ParcG
Motif
Other DBs
NCBI-GeneID:
23889492
NCBI-ProteinID:
XP_012053374
UniProt:
J9VYL1
LinkDB
All DBs
Position
13:64356..68804
Genome browser
AA seq
1325 aa
AA seq
DB search
MSSTDFAAELEKVRRLTGSQLAHQSKPAQLLVAIESTITSTLSTPPPHSSTAYFASLLQC
LEKACADEVGDDEDMAETENMGQGALIPATLYLLAIVVPESPNQVVLSKLSPLLECILPL
YDSALEHPPALRSLLQITTAVVLLAPPQLLSSSPLLKKAWNYLLELNLDPRPKVRHLAQE
GVRKVLTTPIPPKVVAGQHPYLARAREWVMNVLEEEVKTGGARGKKARFADAEDMEGKKA
IWVVQGLRGWVAVWGDEQLSALSSTLLSLPPLPHLTPQIYSLLALLLSPPPSDAASPTPS
VLTNLPTILDSLLSSPPSAGDIPTYLSAIAGALIKMSLQDPTSLATYLPKAWNLLFKEIL
LAPNAPKPVVEAAVSALGQGGLIRYCITDDQILATLSYVRGGSHLPGARQKGRAPFLWKL
LSSLTSALGSNPVRLPHLLKLLESLISRLRLRVLPFGSNPGAPAKADPLGRAPAAAQELL
MDLIKEVGDLRSQRGFEWKDEIDGVVGSAIEVVGVQGVLEVLPLNIEPDASGTPPQPGRA
HLLPLIRSHNTNSSLSFFSSYFRPLSERLFSLKVAAEERGRAQEAKIWEVVVGQIWDCFP
GFCDMPRDMKDGLDASFLGLLTSLLYTQPTLLPSLLKGLSLLISSTTRLASSAAPQEELL
KQFGVSQIDAQANMALLKSLAKDMVSVLLNVFSKMPRESRGMVGDVIGHWVGIMEPSDLV
ETYQTVTTHLSNALSVPPAPANAGESPISHTMLDLLIIFVPQLPLAQSLALFNASSTPSL
LHHRDATVQKKSYRLLKRLLESPTLAPTLTPASYAEFVSKLLSSQPHIGPGAQRDRLQLL
TTLVNVLPQDGLGVLPELVSEAVLGTKEVNEKARDAGFELVVEMGKKMAKGGKVNRAEGE
EDGEVENTSVDASAEEYLTMVAAGLTGTTPHMISASINALSRLLFEFKDQVSDQTISELL
STLTIFLTSKNREIVKSALGFAKVTIVSLPIATLRPHLPQLVPALLGWVHDHKNHFKSKT
IHIFERLIRRFGFDEVYANAGEKVEEKKVLIGIRKRKERAKKKRAGKGDEEEGDKRQSMG
NAFDDILYNSDSDLSSDEDEDAPAKGRTQAQGKGQVKGKRAQQQQQQQQQQQRERREKGG
DVYIRNDEDEPMDLLSRSIAGGVSTNNPALQAPRRKPGQLASKFQTDKSGKLIITDDNSA
DEADPSASAGAAFMANVANTTADGTYRDSRGNLKFNRNTKRAREAEGDILRGLDEEDAKK
ENKLRERKKMRKQLGEEFRAKRAGGDIKREGGPDPYSYVPLGQTGGKKGKKGNFNLTNKK
KGSRG
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgactgacttcgccgccgagctggaaaaagtccgccgcttgaccggctctcag
cttgcacaccaatcaaaaccggcccaacttttggtcgccatcgaatctaccatcaccagc
actctcagcacacctcctccccattcttccaccgcatactttgcatctcttctccaatgc
cttgagaaggcttgtgcagatgaagttggagatgatgaggacatggctgagactgaaaac
atggggcaaggagctcttatccctgccacactttacttgctcgctattgttgttccggag
agccccaaccaggtcgtactttccaaactctcacctttgctcgagtgtattttgcctctt
tacgactctgctttggaacatcccccagctttacgctcacttctgcaaatcacaaccgcc
gttgtcctccttgcaccccctcaattgttgtcctcctcgcctcttcttaagaaggcttgg
aattatctcctcgaacttaacctcgaccctcgtccaaaggtccgacatctcgcccaagaa
ggtgtacgtaaggtgctcaccactcccatccctcccaaggttgtcgctgggcaacatcct
tacctcgctagggcccgagagtgggtgatgaatgtccttgaagaagaagtcaagactggc
ggtgctagaggcaagaaggccagatttgcggatgccgaagatatggaagggaagaaggct
atctgggttgtacagggtctccgtggatgggtagctgtttggggcgacgaacaactgtcg
gcgcttagctcgacgctcctctctctccctcccctcccccacctcacacctcaaatttat
tcacttcttgccttgctcttgtctcctcctccgtcggacgctgcctcgcccaccccctct
gttcttaccaaccttcctaccatccttgactccttgctttcctctcccccttccgccggc
gatatacccacctatctctcagccatcgctggagctctcatcaagatgtctcttcaagat
cccacttccttggccacgtacctgcccaaagcttggaatttactcttcaaagaaatcttg
cttgctcccaacgctcccaagcctgttgttgaggctgccgtctctgctcttggtcaaggc
ggtttgatcaggtattgcatcaccgatgatcagatcttggctactctcagctatgttcga
ggcggaagccaccttcccggtgcgaggcaaaagggcagagcgcccttcttatggaagttg
ctctcttccctcacttccgctttgggttccaaccctgtccgtcttccccaccttctcaag
ctgcttgagtcacttatttcccgccttcgtctccgcgtcctgcctttcgggtccaaccct
ggcgctccagccaaagccgatcctttgggccgagcacctgctgctgcgcaagagttgttg
atggatttgatcaaggaagttggtgacctgagatctcagcgagggttcgagtggaaggat
gagatcgatggagttgtgggtagtgccatagaagttgtcggtgtgcaaggtgttttagag
gtgctgcctttgaatattgaacctgatgcctcgggaacccctcctcagcccggccgcgcc
catttgctcccccttatccgttcgcacaacaccaactcttccctctccttcttctcttcc
tacttccgtcctttgtctgagcgcctgttctcccttaaggttgccgccgaagaacggggt
agagcccaggaggctaagatctgggaggttgtcgtcgggcagatttgggactgtttccca
ggtttctgcgatatgcctcgggacatgaaggacggacttgatgcttctttcctcggtttg
ctcacttcccttctctacacccaacccaccctccttccttcgctcctcaagggtctttcc
ctcctcattagctctaccacccgtcttgcgtcttctgccgcccctcaggaagagcttctt
aaacaattcggcgtctctcaaattgatgctcaggcgaacatggctctcctcaagtctttg
gccaaggatatggtctctgtattattgaacgtgttctccaagatgcctcgtgaatctagg
ggtatggtcggggacgttattggtcactgggtaggaattatggagccttcagatttggtt
gagacatatcaaactgttaccactcacttgtccaatgcgctctctgttcctcctgcgcct
gccaatgccggtgaaagccccatctcccacaccatgctcgatctcttgatcatctttgtc
cctcaactccctcttgcccaatctctagcattgttcaacgcttcatccactccttccttg
ctgcaccaccgtgacgccactgtccagaagaagtcctatcgactcttgaagcgtcttctc
gagtcaccgaccttggctcccactctcactcccgcctcctatgccgagttcgtgtctaag
ctcctctcttcacaacctcacatcggccctggtgcccagcgtgaccgtcttcaattgtta
accactctcgtaaacgttcttcctcaggacgggcttggtgtcttgccagagttggtcagt
gaagccgtgttgggtactaaggaggtcaatgaaaaggcgagagatgctggtttcgaactc
gtcgtggagatgggcaagaagatggccaaaggtggaaaggtcaaccgagctgaaggggag
gaggatggtgaggtggagaacacttcagtggatgccagtgcagaggagtacttgacgatg
gtcgctgctggtttgactggtactacacctcatatgatcagtgcgagcatcaatgcttta
tcaaggttactatttgagttcaaagaccaagtttccgaccaaaccatttccgaactcctc
tcgactctcaccatctttctcacctccaagaaccgagagattgtcaaatccgctcttggt
tttgccaaggtcaccatcgtctctcttcccatcgctactcttcgccctcaccttccgcaa
ctcgttcccgcccttctcggctgggtgcacgaccacaagaatcacttcaaatctaagact
atccatatctttgaacgactcattcgcagattcggcttcgacgaagtttacgccaacgct
ggtgaaaaggtcgaggagaagaaggttctgattggtattaggaagaggaaggaacgagct
aagaagaagcgagctggtaagggcgatgaggaagaaggtgataagaggcaaagtatgggt
aacgcgttcgatgatatcctttacaactccgactccgatttatcttctgacgaggatgag
gatgcccctgctaagggccggactcaggcgcagggtaaaggccaggtcaagggcaagaga
gctcagcaacaacagcaacagcaacagcaacagcagagagaaagaagagagaagggaggg
gatgtttacatccgaaacgatgaggatgagcccatggatctcctgtcgagatcaattgct
ggtggagtctctacaaataaccctgctctccaagctcctcgccgtaaacccggtcagctc
gcctctaaattccaaactgacaagtccggaaaactcatcatcaccgatgacaactctgcc
gacgaggccgatccttcagcttctgccggtgctgccttcatggctaacgttgccaacact
actgctgatggcacttaccgcgattctcgaggtaacttgaagttcaatcgtaacaccaag
cgagcccgagaggcggaaggtgatatcttgagaggtttggatgaggaggatgcgaagaag
gagaacaaattgagggaaaggaagaagatgaggaaacagcttggtgaagagtttagggcc
aagcgagccggtggtgatatcaaacgcgaaggaggacctgatccatactcttacgtccct
ctcggacagacaggggggaagaagggaaagaagggcaacttcaaccttactaacaaaaag
aaggggtccagaggatag
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