Cryptococcus neoformans var. grubii H99: CNAG_06626
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Entry
CNAG_06626 CDS
T08175
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CNAG_06626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cng03041
]
CNAG_06626
03009 Ribosome biogenesis [BR:
cng03009
]
CNAG_06626
Enzymes [BR:
cng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CNAG_06626
Spliceosome [BR:
cng03041
]
Complex A
U2 snRNP components
U2 related factors
CNAG_06626
Complex B
CNAG_06626
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
CNAG_06626
Ribosome biogenesis [BR:
cng03009
]
Eukaryotic type
90S particles
Helicases
CNAG_06626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
DEAD
Helicase_C
AAA_22
SRP54
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
Motif
Other DBs
NCBI-GeneID:
23889805
NCBI-ProteinID:
XP_012050740
UniProt:
J9VRA8
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All DBs
Position
7:312373..315172
Genome browser
AA seq
783 aa
AA seq
DB search
MSEPPAKRSKMDSTATSENNPYLAHRNEGPSYGGMTNGASGVTGAIDRNEHPLNGMVPRK
VTVDQAKKIMDGDVNPFRNLASWSNTYKRILEQRKGLPVYQKMQEFLTVFNENQIVVMEG
QTGSGKTTQIPQFVCYSDLPMLRGKMVACTQPRRVAAMSVAKRVADEMDVQLGKQVGYSI
RFEDMTEPGTTFLKYMTDGMLLREAMNDPLLERYSTVILDEAHERTLATDILMGLLKDIA
KRRPDLKIIVMSATLDVAKFQKYFGDTNPTGLAPVVKVSGRTFPVETFFTQEPENDYVEA
AIRTVLFIHQAEDEGDVLLFLTGEEEIEDACRKIRAEGEELANKGMAGPLLVVPLYSSLP
PHQQQRIFDAAPPARKDGLPGRKVVVSTNIAETSLTIDGIVYVVDPGFCKQKVYNPRIRV
ESLLVTPISKASAMQRAGRAGRTRPGKCFRLYTERDFVKELEEQTHPEILRSNLANTVLE
LIKLGIKDLVHFDYMDAPAPETIMRALELLHYLAALDDDGNLTPLGSIMAEFPLDPQLAK
MLIVSPEFGCSNEILSLTAMLSVPNVFMRPASQRKEADLAKAQFTHPDGDHLTMLNVYHA
YKSNEGDAKNWCWQNYLNQRSLAQADNVRTQLKRAMEKFDLELCSTAWEDRNYWNNIRQA
LTCGFFMHVAHKEGEKGSYMTVKDNQVVRLHLSCGLDTTPEWVIYNEFVLTTANFIRTVT
EVRPEWLLEYAPQYFDPETFPANSETRRALQRVLDRKLGKISSSKHGKDGKDKKDKKKKR
KAE
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagccccctgctaaaaggtcaaagatggactctactgcaacttccgaaaacaat
ccctacctcgcccacaggaatgagggcccttcatacggaggaatgaccaacggcgccagc
ggtgtgactggcgctatcgaccggaatgaacacccattaaacggaatggttcctagaaaa
gttaccgttgaccaggctaagaagatcatggatggcgatgtcaaccctttcaggaatctc
gcttcttggtccaacacctacaagagaatcttggagcagcgaaagggtctacccgtctac
cagaagatgcaggagttccttacagtcttcaacgagaaccagattgtagttatggaaggc
cagaccggttccggaaagactacgcagattcctcagttcgtctgttattctgatctgccg
atgctgaggggcaagatggtcgcctgtactcaacctcgacgagtagctgctatgagtgtt
gctaagcgagtcgccgatgaaatggatgtgcaattgggaaagcaggtcggttactctatt
cgatttgaagatatgaccgaacctgggactaccttccttaagtacatgaccgatggtatg
ctcctccgagaagccatgaacgaccccttgctcgagcgatactcaacagttattttggac
gaagcgcacgagcgtacattggccacggatatcttgatgggcctcttgaaagacattgca
aagagacgaccagacttgaaaatcattgtaatgtctgctactcttgatgttgcaaagttt
caaaagtacttcggagacaccaaccccaccggcctcgcccctgtcgtcaaagtttctggt
cgaactttccccgtcgaaacttttttcacacaagagcccgaaaacgattatgtcgaagct
gctatccgaacagttcttttcattcatcaagcagaggatgaaggagatgttttgctgttc
ttaactggtgaagaggaaatcgaagatgcttgccgaaaaatcagagccgagggcgaagag
cttgccaataagggcatggctggtcctttgttggttgtccctctgtactcttcccttccc
cctcatcaacaacagcgaattttcgacgctgctcctcctgcgcgcaaggatggtctcccg
ggacgaaaggtcgtcgtttccaccaacattgccgaaacctccctcaccatcgacggtatc
gtttacgtcgttgatcccggtttctgcaagcaaaaagtctacaaccctcgtatccgagtg
gagtccttgttagtcacccctatatcgaaggcgtcagcgatgcagcgtgctggtcgtgct
ggtcgtacaaggcctggcaagtgtttcaggttgtacacggagagggactttgtcaaagag
ttggaggagcagacccacccggaaatattgaggagcaatttggcaaacacagttttggaa
ttgatcaagctcggtatcaaggatcttgtccactttgactacatggacgctcctgcaccg
gagactatcatgcgtgctcttgagctgttgcattatcttgctgctctcgacgatgacggc
aacctcacccctctcggttctatcatggccgaattccctctcgatcctcagttggccaag
atgctcatcgtctctcccgaattcggctgctccaacgagatcctctctctcaccgccatg
ctttcagtccccaacgtcttcatgcgtcccgcctctcaacgaaaagaagctgacttagct
aaggcccaattcacccacccagacggcgatcaccttaccatgcttaacgtttaccacgcc
tacaagtctaatgagggcgatgcgaagaactggtgttggcaaaactaccttaaccaacga
agtcttgcccaggcagacaacgttcgaacacagttgaagcgagcgatggagaagtttgac
ctggagttgtgcagtacggcatgggaggacaggaactattggaacaacatccgtcaggcg
ttaacttgtggcttcttcatgcatgtggcgcataaggagggtgaaaagggtagctatatg
actgttaaggacaaccaggttgtacgactgcatctttcttgcggcttagacactacacct
gaatgggtcatctacaacgaatttgtcttgaccactgccaacttcattcgtacagtaact
gaagttcgccccgaatggcttctcgaatacgctcctcaatactttgaccctgagacattc
cccgccaacagcgaaacccgacgggcgttgcagcgagtgttagacaggaagttgggcaag
atttctagtagcaagcacggaaaggatggcaaggacaagaaggacaagaagaagaagagg
aaggccgaatga
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